Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH36493 | Soybean | cytosol, mitochondrion, nucleus | 60.0 | 44.55 |
| TraesCS5D01G421600.1 | Wheat | cytosol, mitochondrion, nucleus | 58.67 | 39.64 |
| TraesCS5A01G412400.1 | Wheat | cytosol, mitochondrion, nucleus | 58.67 | 37.93 |
| TraesCS5B01G416100.1 | Wheat | cytosol, mitochondrion, nucleus | 54.67 | 35.34 |
| CDY21300 | Canola | nucleus | 56.0 | 27.1 |
| AT4G04360.1 | Thale cress | extracellular, golgi | 60.0 | 25.57 |
| TraesCS5D01G421400.1 | Wheat | endoplasmic reticulum, plasma membrane | 60.0 | 25.28 |
| TraesCS5A01G412700.1 | Wheat | endoplasmic reticulum, plasma membrane | 60.0 | 25.28 |
| EER90798 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 60.0 | 25.14 |
| TraesCS5B01G416300.1 | Wheat | endoplasmic reticulum, plasma membrane | 60.0 | 25.14 |
| KRH11478 | Soybean | golgi | 60.0 | 24.86 |
| TraesCS5A01G412800.1 | Wheat | extracellular, plasma membrane | 58.67 | 24.72 |
| HORVU5Hr1G099550.1 | Barley | endoplasmic reticulum, plasma membrane | 60.0 | 24.59 |
| Solyc07g049730.2.1 | Tomato | nucleus | 64.0 | 24.37 |
| GSMUA_Achr5P24760_001 | Banana | golgi | 61.33 | 24.34 |
| TraesCS5B01G416000.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 60.0 | 24.32 |
| Os03t0777500-01 | Rice | endoplasmic reticulum, plasma membrane | 58.67 | 24.04 |
| Bra000792.1-P | Field mustard | extracellular | 56.0 | 24.0 |
| CDX90862 | Canola | extracellular | 56.0 | 24.0 |
| TraesCS5A01G412200.1 | Wheat | plastid | 58.67 | 23.78 |
| CDX94551 | Canola | extracellular, golgi, vacuole | 56.0 | 23.6 |
| CDX90859 | Canola | extracellular | 54.67 | 23.43 |
| Zm00001d034279_P001 | Maize | extracellular | 56.0 | 23.33 |
| Solyc01g098600.2.1 | Tomato | cytosol, mitochondrion, nucleus, plastid | 38.67 | 20.86 |
| HORVU5Hr1G099640.1 | Barley | extracellular, mitochondrion, plasma membrane, plastid | 57.33 | 19.72 |
| GSMUA_Achr6P04630_001 | Banana | plastid | 66.67 | 19.23 |
| Solyc07g005180.2.1 | Tomato | nucleus | 33.33 | 14.79 |
Protein Annotations
| EnsemblPlants:Solyc02g080960.1.1 | EnsemblPlantsGene:Solyc02g080960.1 | InterPro:DUF1068 | PANTHER:PTHR32254 | PANTHER:PTHR32254:SF11 | PFAM:PF06364 |
| UniParc:UPI000276921A | UniProt:K4B9W6 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr2:+:45037307..45037534
Molecular Weight (calculated)
8733.3 Da
IEP (calculated)
5.180
GRAVY (calculated)
-1.139
Length
75 amino acids
Sequence
(BLAST)
(BLAST)
1: MEGETVENQR RADMQLLESK KMVSQYQKEA DKCTSGMGTC EEAREKAENA LEAQRQVTSM WELRARHQGW KQELV
001: MARHTAALKI GLALLGLSMA GYILGPPLYW HLTEALAAVS ASSCPSCPCE CSTYSAVTIP KELSNASFAD CAKHDPEVNE DTEKNYAELL TEELKLREAE
101: SLEKHKRADM GLLEAKKVTS SYQKEADKCN SGMETCEEAR EKAELALAEQ KKLTSRWEER ARQKGWREGS TKPNVKSKSN VQVA
101: SLEKHKRADM GLLEAKKVTS SYQKEADKCN SGMETCEEAR EKAELALAEQ KKLTSRWEER ARQKGWREGS TKPNVKSKSN VQVA
Arabidopsis Description
At1g05070/T7A14_6 [Source:UniProtKB/TrEMBL;Acc:Q94AB8]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.