Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G07860.1 | KRG97393 | AT1G27300.1 | 21798944 |
| AT1G07860.1 | KRH31520 | AT1G27300.1 | 21798944 |
| AT1G07860.1 | KRH76090 | AT1G27300.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G07860.1 | Thale cress | plastid | 23.33 | 25.93 |
| CDY32810 | Canola | endoplasmic reticulum, golgi, mitochondrion | 20.67 | 19.38 |
Protein Annotations
| EnsemblPlants:KRG88697 | EnsemblPlantsGene:GLYMA_U034200 | EntrezGene:102663262 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR34189 | PANTHER:PTHR34189:SF3 | ProteinID:KRG88697 | ProteinID:KRG88697.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0002958A9A | UniProt:K7LPT0 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chrscaffold_32:-:179402..180193
Molecular Weight (calculated)
16798.9 Da
IEP (calculated)
9.345
GRAVY (calculated)
-0.509
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: MQQRSSSSSL RCSGDEHRAI NVGAEMQQQQ HTKRRRNLDE DSLPIYHRSL TGRRDTFRSR SPATEKGIHA IPALVLLCLF TLWWFSFPVD VEIKDGRITA
101: IRQIHTSVPH NTRIDLTILA VAASSPIPAN NPQNLSGEDG TYLQPVSSPN
101: IRQIHTSVPH NTRIDLTILA VAASSPIPAN NPQNLSGEDG TYLQPVSSPN
001: MAERSFSQLP ISSSHIGRRT GNTRRGIFPV SEYWIHAIPV IVFLCFFTLW IFSHSVSVMN DGEIMSIHRL EKSMAVRNES HVSLAILASS AVSPASSALV
101: AVVSTNQNLT TFHNATQSQQ NATQSVNKAK QPHAV
101: AVVSTNQNLT TFHNATQSQQ NATQSVNKAK QPHAV
Arabidopsis Description
Serine/Threonine-kinase RLCKVII protein [Source:UniProtKB/TrEMBL;Acc:Q8RY98]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.