CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH43882	Soybean	endoplasmic reticulum, plastid	86.48	87.25
KRH18862	Soybean	golgi, plasma membrane, vacuole	37.72	86.53
Os08t0481800-01	Rice	plastid	34.16	80.33
GSMUA_Achr5P17890_001	Banana	mitochondrion, plasma membrane, plastid	47.69	79.53
GSMUA_Achr10P...	Banana	mitochondrion, plasma membrane, plastid	47.51	79.23
Os09t0470000-01	Rice	endoplasmic reticulum, mitochondrion, plasma membrane	14.23	79.21
AT5G64290.1	Thale cress	plastid	74.38	74.25
Bra024282.1-P	Field mustard	plastid	72.95	73.87
CDY18717	Canola	plastid	73.84	73.71
Bra037771.1-P	Field mustard	plastid	73.84	73.71
CDY43805	Canola	plastid	72.78	73.69
CDX81219	Canola	plastid	72.6	73.38
CDX84512	Canola	plastid	72.95	72.95
VIT_03s0017g00640.t01	Wine grape	plastid	72.24	71.99
PGSC0003DMT400032652	Potato	plastid	73.49	70.72
EES14336	Sorghum	golgi, plastid, vacuole	65.84	70.08
Solyc01g105540.2.1	Tomato	plastid	70.82	69.82
Zm00001d005950_P001	Maize	plastid	68.68	69.68
Zm00001d031253_P001	Maize	plastid	68.15	69.51
TraesCS7D01G283000.1	Wheat	unclear	68.51	69.24
TraesCS7B01G199700.1	Wheat	plasma membrane, plastid	68.51	69.24
TraesCS7A01G285000.1	Wheat	golgi	68.51	69.24
TraesCS5A01G248900.1	Wheat	golgi, unclear	67.26	69.23
EES15485	Sorghum	plastid	67.79	69.15
HORVU7Hr1G063220.1	Barley	plastid	68.33	69.06
EER96900	Sorghum	plastid	68.33	68.94
TraesCS5B01G246600.1	Wheat	plastid	67.44	68.91
GSMUA_Achr10P...	Banana	mitochondrion	67.79	68.53
TraesCS5D01G256100.1	Wheat	mitochondrion, plastid	66.9	68.36
EES04490	Sorghum	plastid	66.01	65.9
HORVU5Hr1G070230.1	Barley	plastid	66.9	65.73
AT5G64280.1	Thale cress	plastid	64.06	65.57
Bra031926.1-P	Field mustard	plastid	63.52	64.21
CDY31328	Canola	plastid	62.99	63.55
Os09t0469950-00	Rice	plasma membrane	28.83	57.45
PGSC0003DMT400017518	Potato	plastid	27.05	56.09
CDY46791	Canola	plasma membrane	62.46	53.42
Zm00001d020803_P001	Maize	peroxisome	12.28	41.57
KRH24714	Soybean	plastid	39.5	40.14
KRH29718	Soybean	plastid	39.68	39.82

Protein Annotations

EntrezGene:100776794	MapMan:24.2.7.1.2	EMBL:ACUP02009148	InterPro:CitT-rel	EnsemblPlantsGene:GLYMA_15G055600	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006814	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	UniProt:I1MDY6	EnsemblPlants:KRH10575	ProteinID:KRH10575	ProteinID:KRH10575.1
PFAM:PF00939	PANTHER:PTHR42826	PANTHER:PTHR42826:SF1	InterPro:SLC13A/DASS	SUPFAM:SSF101447	TIGRFAMs:TIGR00785
TMHMM:TMhelix	UniParc:UPI000233B5F2	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr15:-:4350474..4354855

Molecular Weight (calculated)

60688.3 Da

IEP (calculated)

9.934

GRAVY (calculated)

0.524

Length

562 amino acids

Sequence
(BLAST)

001: MESFALSAST SFSRFSQLHH RPRPVISRSQ SLRSPITISQ RFSFPSKPSS TFNFNFKFNR FSKPHYPIQA SPSSSSSPPP PPPPPPPPPL QGAKPIPFII
101: SISIGLIVRF FVPKPVEVTP EAWQLLSIFL STIAGLVLSP LPVGAWAFLG LTASVVTKTL TFTAAFSAFT NEVIWLIVIS FFFARGFVKT GLGDRIATYF
201: VKWMGKSTLG LSYGLTFSEV LIAPAMPSTT ARAGGVFLPI IKSLSLSAGS EPASPTSKKL GAYLIQNQFQ SAGNSSALFL TAAAQNLLCL KLAEELGVIV
301: PNPWVTWFKA ASLPAVVCLL LTPLILYKLY PPEIKDTPEA PALAAKKLES MGPVTKNEWI MVGTMLLAVS LWIFGDTIGI ASAVAAMIGL SILLLLGVLD
401: WNDCLNEKSA WDTLAWFAIL VGMASQLTNL GIVNWMSDYV AHNLRSFSLS WPASLAVLQA AYFFIHYLFA SQTGHVGALY SAFLAMHRAA GVPGVLAALA
501: LGYNTNLFGA ITHYSSGQAA VYYGAGYVDL PDIFKMGFIM AFINAIIWGG VGSVWWKFLG LY

Best Arabidopsis Sequence Match ( AT5G64290.1 )
(BLAST)

001: MESFALHSLS TTATSTLLSH HHHHHPSRLS LLRRTSSRSP PSTISLRSLS VQPLSFPLLK PIPRFSTRIA AAPQDNAPPP PPPSPSPSPS PQGAKLIPLI
101: LSISVGLILR FAVPVPEGVT PQGWQLLSIF LSTIAGLVLS PLPVGAWAFI GLTASIVTKT LSFSAAFSAF TSEVIWLIVI SFFFARGFVK TGLGDRIATY
201: FVKWLGKSTL GLSYGLTLSE ALIAPAMPST TARAGGIFLP IIKSLSLSAG SKPNDSSSRK LGSYLIQSQF QCAGNSSALF LTAAAQNLLC LKLAEELGVV
301: ISNPWVSWFK AASLPAIISL LCTPLILYKL YPPETKDTPE APGIAATKLK QMGPVTKNEW IMVGTMLLAV TLWICGETLG IPSVVAAMIG LSILLVLGVL
401: NWDDCLSEKS AWDTLAWFAV LVGMAGQLTN LGVVTWMSDC VAKVLQSLSL SWPAAFGLLQ AAYFFIHYLF ASQTGHVGAL FSAFLAMHIA AGVPGILAAL
501: ALAYNTNLFG ALTHYSSGQA AVYYGAGYVD LPDVFKIGFV MATINAIIWG VVGTFWWKFL GLY

Arabidopsis Description

DIT2-1Dicarboxylate transporter 2.1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FMF7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.