CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 2
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031253_P001	Maize	plastid	92.92	92.92
Os08t0481800-01	Rice	plastid	39.2	90.38
TraesCS7D01G283000.1	Wheat	unclear	85.3	84.53
TraesCS7A01G285000.1	Wheat	golgi	85.3	84.53
HORVU7Hr1G063220.1	Barley	plastid	85.12	84.35
TraesCS7B01G199700.1	Wheat	plasma membrane, plastid	84.94	84.17
EES14336	Sorghum	golgi, plastid, vacuole	80.4	83.9
GSMUA_Achr5P17890_001	Banana	mitochondrion, plasma membrane, plastid	49.0	80.12
GSMUA_Achr10P...	Banana	mitochondrion, plasma membrane, plastid	47.91	78.34
EER96900	Sorghum	plastid	74.59	73.79
EES04490	Sorghum	plastid	73.68	72.11
KRH18862	Soybean	golgi, plasma membrane, vacuole	31.03	69.8
GSMUA_Achr10P...	Banana	mitochondrion	70.05	69.42
CDX81219	Canola	plastid	69.87	69.24
Bra024282.1-P	Field mustard	plastid	69.15	68.65
CDY43805	Canola	plastid	68.97	68.47
Bra037771.1-P	Field mustard	plastid	69.69	68.21
CDY18717	Canola	plastid	69.69	68.21
KRH43882	Soybean	endoplasmic reticulum, plastid	68.78	68.04
CDX84512	Canola	plastid	69.33	67.97
AT5G64290.1	Thale cress	plastid	69.33	67.85
KRH10575	Soybean	plastid	69.15	67.79
VIT_03s0017g00640.t01	Wine grape	plastid	68.6	67.02
PGSC0003DMT400032652	Potato	plastid	70.05	66.1
Solyc01g105540.2.1	Tomato	plastid	68.24	65.96
Bra031926.1-P	Field mustard	plastid	63.34	62.77
AT5G64280.1	Thale cress	plastid	62.25	62.48
CDY31328	Canola	plastid	62.98	62.3
CDY46791	Canola	plasma membrane	61.89	51.9
PGSC0003DMT400017518	Potato	plastid	24.68	50.18
EES16067	Sorghum	plastid	41.02	38.7

Protein Annotations

MapMan:24.2.7.1.2	EntrezGene:8055384	UniProt:C5YJR5	InterPro:CitT-rel	EnsemblPlants:EES15485	ProteinID:EES15485
ProteinID:EES15485.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006814
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	PFAM:PF00939	PANTHER:PTHR42826
PANTHER:PTHR42826:SF4	InterPro:SLC13A/DASS	EnsemblPlantsGene:SORBI_3007G226800	unigene:Sbi.16075	TIGRFAMs:TIGR00785	TMHMM:TMhelix
UniParc:UPI0001A879BD	RefSeq:XP_002445990.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:65398273..65402052

Molecular Weight (calculated)

58680.2 Da

IEP (calculated)

9.785

GRAVY (calculated)

0.621

Length

551 amino acids

Sequence
(BLAST)

001: MASLRLAVTH CPALPLPTPH SHLRRRQLQL HPYPNPLSLS PRISSHLSPI PRRHLPPLFA SASASQAETK PPPPPTEASG GAKPLPLLIS LAAGLAVRFL
101: VPRPAEVTPE AWQLLSIFLS TIAGLVLGPL PVGAWAFLGL TATVATRTLP FTAAFGAFTN EVIWLIVISF FFARGFVKTG LGDRVATYFV KWLGRSTLGL
201: SYGLAISEAF ISPAMPSTTA RAGGVFLPIV KSLSLSSGSK PNDPSAKKLG SYLVQSQLQA AANSSALFLT AAAQNLLCLK LAEEIGVNIG NPWITWFKVA
301: SVPALLGLLV TPYLIYKIFP PEIKDTPEAP ALAAEKLKLM GPVTKNEWVM IATMLLAVSL WIFGEAIGVS SVVAAMIGLS ILLLLGVLNW EDCLNEKSAW
401: DTLAWFAILV GLAGQLTNLG IVSWMSNCVA KVLQSFSLSW PAAFGVLQAS YFLIHYIFAS QTAHVGALYS AFLAMHLAAG VPAVMSALAL AYNANLFGAL
501: THYSSGQSAV YFGAGYVDLP DVFKLGFITA ALNAVVWGVA GAFWWKFLGL Y

Best Arabidopsis Sequence Match ( AT5G64290.1 )
(BLAST)

001: MESFALHSLS TTATSTLLSH HHHHHPSRLS LLRRTSSRSP PSTISLRSLS VQPLSFPLLK PIPRFSTRIA AAPQDNAPPP PPPSPSPSPS PQGAKLIPLI
101: LSISVGLILR FAVPVPEGVT PQGWQLLSIF LSTIAGLVLS PLPVGAWAFI GLTASIVTKT LSFSAAFSAF TSEVIWLIVI SFFFARGFVK TGLGDRIATY
201: FVKWLGKSTL GLSYGLTLSE ALIAPAMPST TARAGGIFLP IIKSLSLSAG SKPNDSSSRK LGSYLIQSQF QCAGNSSALF LTAAAQNLLC LKLAEELGVV
301: ISNPWVSWFK AASLPAIISL LCTPLILYKL YPPETKDTPE APGIAATKLK QMGPVTKNEW IMVGTMLLAV TLWICGETLG IPSVVAAMIG LSILLVLGVL
401: NWDDCLSEKS AWDTLAWFAV LVGMAGQLTN LGVVTWMSDC VAKVLQSLSL SWPAAFGLLQ AAYFFIHYLF ASQTGHVGAL FSAFLAMHIA AGVPGILAAL
501: ALAYNTNLFG ALTHYSSGQA AVYYGAGYVD LPDVFKIGFV MATINAIIWG VVGTFWWKFL GLY

Arabidopsis Description

DIT2-1Dicarboxylate transporter 2.1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FMF7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.