CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra024282.1-P	Field mustard	plastid	99.82	99.82
CDX84512	Canola	plastid	98.92	97.69
CDX81219	Canola	plastid	90.81	90.65
AT5G64290.1	Thale cress	plastid	90.81	89.52
CDY18717	Canola	plastid	90.45	89.17
GSMUA_Achr5P17890_001	Banana	mitochondrion, plasma membrane, plastid	50.63	83.38
GSMUA_Achr10P...	Banana	mitochondrion, plasma membrane, plastid	50.45	83.09
Os09t0470000-01	Rice	endoplasmic reticulum, mitochondrion, plasma membrane	14.96	82.18
Os08t0481800-01	Rice	plastid	35.32	82.01
KRH18862	Soybean	golgi, plasma membrane, vacuole	32.97	74.69
KRH43882	Soybean	endoplasmic reticulum, plastid	74.77	74.51
PGSC0003DMT400032652	Potato	plastid	76.94	73.12
Solyc01g105540.2.1	Tomato	plastid	74.95	72.98
KRH10575	Soybean	plastid	73.69	72.78
VIT_03s0017g00640.t01	Wine grape	plastid	73.69	72.52
TraesCS5A01G248900.1	Wheat	golgi, unclear	70.45	71.61
TraesCS5B01G246600.1	Wheat	plastid	70.27	70.91
HORVU7Hr1G063220.1	Barley	plastid	70.99	70.86
TraesCS7D01G283000.1	Wheat	unclear	70.99	70.86
TraesCS7A01G285000.1	Wheat	golgi	70.99	70.86
TraesCS5D01G256100.1	Wheat	mitochondrion, plastid	69.91	70.55
TraesCS7B01G199700.1	Wheat	plasma membrane, plastid	70.63	70.5
Zm00001d005950_P001	Maize	plastid	70.09	70.22
EER96900	Sorghum	plastid	70.27	70.02
Zm00001d031253_P001	Maize	plastid	69.01	69.51
EES15485	Sorghum	plastid	68.47	68.97
GSMUA_Achr10P...	Banana	mitochondrion	68.65	68.53
EES14336	Sorghum	golgi, plastid, vacuole	64.68	67.99
CDY31328	Canola	plastid	68.11	67.86
HORVU5Hr1G070230.1	Barley	plastid	69.37	67.31
EES04490	Sorghum	plastid	68.11	67.14
Os09t0469950-00	Rice	plasma membrane	29.19	57.45
CDY46791	Canola	plasma membrane	65.77	55.56
PGSC0003DMT400017518	Potato	plastid	26.67	54.61
Zm00001d020803_P001	Maize	peroxisome	13.69	45.78
CDY53969	Canola	plastid	40.72	40.94
CDX97208	Canola	plastid	41.44	40.42

Protein Annotations

MapMan:24.2.7.1.2	GO:A0A078HYY2	UniProt:A0A078HYY2	EnsemblPlants:CDY43805	ProteinID:CDY43805	ProteinID:CDY43805.1
InterPro:CitT-rel	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006814
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00077310001	PFAM:PF00939
PANTHER:PTHR42826	PANTHER:PTHR42826:SF1	InterPro:SLC13A/DASS	TIGRFAMs:TIGR00785	TMHMM:TMhelix	UniParc:UPI0004EF158C
SEG:seg	:	:	:	:	:

Description

BnaA06g23410DBnaA06g23410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HYY2]

Coordinates

chrLK032568:-:220848..223438

Molecular Weight (calculated)

59032.6 Da

IEP (calculated)

9.716

GRAVY (calculated)

0.632

Length

555 amino acids

Sequence
(BLAST)

001: MESFALHSLS TTATSASFSH HPSRQSLLRR ISSRSPPSSI SLRSHSVKPL AFPLLKPIHR FSTRIAAAPR DDSPPPPPSP QPPQGAKLVP LILSLSVGLI
101: LRFAVSVPEG VTPQGWQLLS IFLATIAGLV LSPLPVGAWA FIGLTASIVT KTLSFSAAFS AFTSEVIWLI VISFFFARGF VKTGLGDRIA TYFVKWLGKS
201: TLGLSYGLTL SEALIAPAMP STTARAGGIF LPIIKSLSLS AGSKPGDPSS RKLGSYLIQS QFQCAGNSSA LFLTAAAQNL LCLKLAEELG VVIANPWVSW
301: FKAASLPAII SLLCTPLILY KLYPPETKDT PDAPGIAALK LKQMGPVTKN EWIMVGTMVL AVTLWICGET LGIPSVVAAM IGLSILLLLG VLNWDDCLSE
401: KSAWDTLAWF AVLVGMAGQL TNLGVVSWMS DCVAKALQSL SLSWPAAFGL LQAAYFFIHY LFASQTGHVG ALFSAFLAMN IAAGVPGILA ALALAYNTNL
501: FGALTHYSSG QAAVYYGAGY VDLPDVFKIG FVMATINAII WGVVGTFWWK FLGLY

Best Arabidopsis Sequence Match ( AT5G64290.1 )
(BLAST)

001: MESFALHSLS TTATSTLLSH HHHHHPSRLS LLRRTSSRSP PSTISLRSLS VQPLSFPLLK PIPRFSTRIA AAPQDNAPPP PPPSPSPSPS PQGAKLIPLI
101: LSISVGLILR FAVPVPEGVT PQGWQLLSIF LSTIAGLVLS PLPVGAWAFI GLTASIVTKT LSFSAAFSAF TSEVIWLIVI SFFFARGFVK TGLGDRIATY
201: FVKWLGKSTL GLSYGLTLSE ALIAPAMPST TARAGGIFLP IIKSLSLSAG SKPNDSSSRK LGSYLIQSQF QCAGNSSALF LTAAAQNLLC LKLAEELGVV
301: ISNPWVSWFK AASLPAIISL LCTPLILYKL YPPETKDTPE APGIAATKLK QMGPVTKNEW IMVGTMLLAV TLWICGETLG IPSVVAAMIG LSILLVLGVL
401: NWDDCLSEKS AWDTLAWFAV LVGMAGQLTN LGVVTWMSDC VAKVLQSLSL SWPAAFGLLQ AAYFFIHYLF ASQTGHVGAL FSAFLAMHIA AGVPGILAAL
501: ALAYNTNLFG ALTHYSSGQA AVYYGAGYVD LPDVFKIGFV MATINAIIWG VVGTFWWKFL GLY

Arabidopsis Description

DIT2-1Dicarboxylate transporter 2.1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FMF7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.