CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plasma membrane, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Predotar:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008876.1-P	Field mustard	extracellular, plasma membrane, vacuole	52.2	100.0
CDY53969	Canola	plastid	95.25	98.19
AT5G12860.1	Thale cress	plastid	88.75	90.66
TraesCS5D01G113100.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	43.06	82.49
GSMUA_Achr4P03580_001	Banana	plastid	71.7	79.84
VIT_06s0004g02120.t01	Wine grape	plastid	78.38	79.79
Solyc11g065830.1.1	Tomato	plastid	76.8	78.74
PGSC0003DMT400018994	Potato	plastid	76.63	78.7
KRH29718	Soybean	plastid	75.22	76.43
KRH24714	Soybean	plastid	74.17	76.31
TraesCS5A01G100600.1	Wheat	golgi, plastid	73.46	75.32
Os12t0515400-01	Rice	plastid	72.41	75.18
TraesCS5B01G105700.1	Wheat	plastid	73.46	75.04
HORVU5Hr1G027720.1	Barley	plastid	72.94	72.55
EES16067	Sorghum	plastid	72.76	70.89
GSMUA_Achr7P27130_001	Banana	plastid	67.66	70.77
Zm00001d023929_P001	Maize	plastid	71.53	70.42
CDY43805	Canola	plastid	40.42	41.44
CDX84512	Canola	plastid	39.89	40.39
CDY18717	Canola	plastid	39.72	40.14
CDX81219	Canola	plastid	39.19	40.11
CDY31328	Canola	plastid	37.79	38.6
CDY46791	Canola	plasma membrane	37.79	32.72

Protein Annotations

MapMan:24.2.7.1.2	GO:A0A078ECY1	EnsemblPlants:CDX97208	ProteinID:CDX97208	ProteinID:CDX97208.1	InterPro:CitT-rel
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006814	GO:GO:0008150
GO:GO:0016020	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00104207001	PFAM:PF00939	PANTHER:PTHR42826	PANTHER:PTHR42826:SF3
InterPro:SLC13A/DASS	SignalP:SignalP-noTM	TIGRFAMs:TIGR00785	TMHMM:TMhelix	UniParc:UPI0004EE84DD	SEG:seg

Description

BnaC09g44170D

Coordinates

chrLK031897:-:1183298..1185735

Molecular Weight (calculated)

60691.3 Da

IEP (calculated)

10.119

GRAVY (calculated)

0.803

Length

569 amino acids

Sequence
(BLAST)

001: MFFTCFLQVH VLTVSPTLQT MASLALSGSC SLAFPLKSRP LLLPRPPSSL NLLKKPLRST ESRFSSVKSP LHIALTKRST LVKASSSASS PAPVAPAPWQ
101: GAAIKPLLAS IATGVIIWFL PVPEGVTRSA WQLLAIFLAT IVGIITQPLP LGAVALLGLG ASVLTKTLTF AAAFSAFGDP IPWLIALAFF FARGFIKTGL
201: GNRVAYQFVR LFGSSSLGLG YSLVFSEALL APAIPSVSAR AGGIFLPLVK SLCVACGSNV GDGTEHRLGA WLMLTCFQTS VISSSMFLTA MAANPLSANL
301: AFNTIKQTIG WTDWAKAAIV PGIVSLIVVP FLLYLIYPPT VKSSPDAPKL AQEKLDKMGP MSKNELIMAA TLFLTVGLWI FGAKLSVDAV TAAILGLSVL
401: LVTGVVTWKE CLAESVAWDT LTWFAALIAM AGYLNKYGLI EWFSQTVVKF VGGLGLSWQL SFGILVLLYF YTHYFFASGA AHIGAMFTAF LSVSTALGTP
501: PYFAALVLAF LSNLMGGLTH YGIGSAPIFY GANYVPLSKW WGYGFLISIV NILIWLGVGG AWWKFIGLW

Best Arabidopsis Sequence Match ( AT5G12860.1 )
(BLAST)

001: MASLALSGSC SLAFPLKSRS LSLPRPPSSS LNLTKPLRSL DSRFSLLKSP LPVSLRRRSS TLVKASSTVA SASSSPTPPL VPAPVPWQGA AIKPLLASIA
101: TGLILWFVPV PEGVTRNAWQ LLAIFLATIV GIITQPLPLG AVALMGLGAS VLTKTLTFAA AFSAFGDPIP WLIALAFFFA RGFIKTGLGN RVAYQFVRLF
201: GSSSLGLGYS LVFSEALLAP AIPSVSARAG GIFLPLVKSL CVACGSNVGD GTEHRLGSWL MLTCFQTSVI SSSMFLTAMA ANPLSANLAF NTIKQTIGWT
301: DWAKAAIVPG LVSLIVVPFL LYLIYPPTVK SSPDAPKLAQ EKLDKMGPMS KNELIMAATL FLTVGLWIFG AKLGVDAVTA AILGLSVLLV TGVVTWKECL
401: AESVAWDTLT WFAALIAMAG YLNKYGLIEW FSQTVVKFVG GLGLSWQLSF GILVLLYFYT HYFFASGAAH IGAMFTAFLS VSTALGTPPY FAALVLAFLS
501: NLMGGLTHYG IGSAPIFYGA NYVPLAKWWG YGFLISIVNI LIWLGVGGAW WKFIGLW

Arabidopsis Description

DIT1Dicarboxylate transporter 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LXV3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.