Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008876.1-P | Field mustard | extracellular, plasma membrane, vacuole | 52.78 | 98.99 |
| CDY53969 | Canola | plastid | 90.84 | 91.67 |
| CDX97208 | Canola | plastid | 90.66 | 88.75 |
| TraesCS5D01G113100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 44.17 | 82.83 |
| GSMUA_Achr4P03580_001 | Banana | plastid | 74.15 | 80.82 |
| VIT_06s0004g02120.t01 | Wine grape | plastid | 80.97 | 80.68 |
| Solyc11g065830.1.1 | Tomato | plastid | 79.71 | 80.0 |
| PGSC0003DMT400018994 | Potato | plastid | 78.64 | 79.06 |
| KRH24714 | Soybean | plastid | 76.3 | 76.85 |
| KRH29718 | Soybean | plastid | 75.94 | 75.54 |
| Os12t0515400-01 | Rice | plastid | 73.97 | 75.18 |
| TraesCS5A01G100600.1 | Wheat | golgi, plastid | 74.69 | 74.95 |
| TraesCS5B01G105700.1 | Wheat | plastid | 74.69 | 74.69 |
| HORVU5Hr1G027720.1 | Barley | plastid | 74.15 | 72.2 |
| GSMUA_Achr7P27130_001 | Banana | plastid | 69.48 | 71.14 |
| Zm00001d023929_P001 | Maize | plastid | 72.89 | 70.24 |
| EES16067 | Sorghum | plastid | 73.25 | 69.86 |
| AT5G64290.1 | Thale cress | plastid | 42.55 | 42.1 |
| AT5G64280.1 | Thale cress | plastid | 38.96 | 39.53 |
Protein Annotations
| MapMan:24.2.7.1.2 | EntrezGene:831126 | UniProt:A0A178UA33 | ProteinID:AED91822.1 | EMBL:AF370494 | ArrayExpress:AT5G12860 |
| EnsemblPlantsGene:AT5G12860 | RefSeq:AT5G12860 | TAIR:AT5G12860 | RefSeq:AT5G12860-TAIR-G | EnsemblPlants:AT5G12860.1 | TAIR:AT5G12860.1 |
| ProteinID:CAB88250.1 | InterPro:CitT-rel | Symbol:DiT1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006810 | GO:GO:0006814 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009528 | GO:GO:0009534 | GO:GO:0009536 |
| GO:GO:0009579 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009624 | GO:GO:0009706 | GO:GO:0009941 |
| GO:GO:0009987 | GO:GO:0015131 | GO:GO:0015139 | GO:GO:0015140 | GO:GO:0015729 | GO:GO:0015742 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019676 | GO:GO:0055085 | GO:GO:0071423 | GO:GO:1902356 |
| RefSeq:NP_568283.2 | ProteinID:OAO90520.1 | PFAM:PF00939 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0005052 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR42826 | PANTHER:PTHR42826:SF3 |
| UniProt:Q9LXV3 | InterPro:SLC13A/DASS | TIGRFAMs:TIGR00785 | TMHMM:TMhelix | UniParc:UPI00000A8141 | SEG:seg |
Description
DIT1Dicarboxylate transporter 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LXV3]
Coordinates
chr5:-:4059579..4062289
Molecular Weight (calculated)
59216.4 Da
IEP (calculated)
10.203
GRAVY (calculated)
0.775
Length
557 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLALSGSC SLAFPLKSRS LSLPRPPSSS LNLTKPLRSL DSRFSLLKSP LPVSLRRRSS TLVKASSTVA SASSSPTPPL VPAPVPWQGA AIKPLLASIA
101: TGLILWFVPV PEGVTRNAWQ LLAIFLATIV GIITQPLPLG AVALMGLGAS VLTKTLTFAA AFSAFGDPIP WLIALAFFFA RGFIKTGLGN RVAYQFVRLF
201: GSSSLGLGYS LVFSEALLAP AIPSVSARAG GIFLPLVKSL CVACGSNVGD GTEHRLGSWL MLTCFQTSVI SSSMFLTAMA ANPLSANLAF NTIKQTIGWT
301: DWAKAAIVPG LVSLIVVPFL LYLIYPPTVK SSPDAPKLAQ EKLDKMGPMS KNELIMAATL FLTVGLWIFG AKLGVDAVTA AILGLSVLLV TGVVTWKECL
401: AESVAWDTLT WFAALIAMAG YLNKYGLIEW FSQTVVKFVG GLGLSWQLSF GILVLLYFYT HYFFASGAAH IGAMFTAFLS VSTALGTPPY FAALVLAFLS
501: NLMGGLTHYG IGSAPIFYGA NYVPLAKWWG YGFLISIVNI LIWLGVGGAW WKFIGLW
101: TGLILWFVPV PEGVTRNAWQ LLAIFLATIV GIITQPLPLG AVALMGLGAS VLTKTLTFAA AFSAFGDPIP WLIALAFFFA RGFIKTGLGN RVAYQFVRLF
201: GSSSLGLGYS LVFSEALLAP AIPSVSARAG GIFLPLVKSL CVACGSNVGD GTEHRLGSWL MLTCFQTSVI SSSMFLTAMA ANPLSANLAF NTIKQTIGWT
301: DWAKAAIVPG LVSLIVVPFL LYLIYPPTVK SSPDAPKLAQ EKLDKMGPMS KNELIMAATL FLTVGLWIFG AKLGVDAVTA AILGLSVLLV TGVVTWKECL
401: AESVAWDTLT WFAALIAMAG YLNKYGLIEW FSQTVVKFVG GLGLSWQLSF GILVLLYFYT HYFFASGAAH IGAMFTAFLS VSTALGTPPY FAALVLAFLS
501: NLMGGLTHYG IGSAPIFYGA NYVPLAKWWG YGFLISIVNI LIWLGVGGAW WKFIGLW
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.