Factsheet for HORVU5Hr1G027720.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
TargetP:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G113100.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	51.4	98.99
TraesCS5B01G105700.1	Wheat	plastid	95.45	98.03
TraesCS5A01G100600.1	Wheat	golgi, plastid	94.58	97.48
Os12t0515400-01	Rice	plastid	79.2	82.66
Bra008876.1-P	Field mustard	extracellular, plasma membrane, vacuole	42.66	82.15
EES16067	Sorghum	plastid	79.2	77.57
Zm00001d023929_P001	Maize	plastid	77.62	76.82
GSMUA_Achr4P03580_001	Banana	plastid	68.18	76.32
PGSC0003DMT400018994	Potato	plastid	73.25	75.63
Solyc11g065830.1.1	Tomato	plastid	73.08	75.32
CDY53969	Canola	plastid	72.03	74.64
AT5G12860.1	Thale cress	plastid	72.2	74.15
VIT_06s0004g02120.t01	Wine grape	plastid	72.03	73.7
CDX97208	Canola	plastid	72.55	72.94
KRH24714	Soybean	plastid	69.58	71.97
KRH29718	Soybean	plastid	70.45	71.96
GSMUA_Achr7P27130_001	Banana	plastid	64.16	67.46
HORVU7Hr1G063220.1	Barley	plastid	40.56	41.73
HORVU5Hr1G070230.1	Barley	plastid	39.16	39.16

Protein Annotations

EnsemblPlants:HORVU5Hr1G027720.1	EnsemblPlantsGene:HORVU5Hr1G027720	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006814	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:CitT-rel
InterPro:SLC13A/DASS	PANTHER:PTHR42826	PANTHER:PTHR42826:SF3	PFAM:PF00939	SEG:seg	TIGRFAMs:TIGR00785
TMHMM:TMhelix	UniParc:UPI000B4714F1	UniProt:A0A287QRB3	MapMan:24.2.7.1.2	:	:

Description

No Description!

Coordinates

chrchr5H:-:158887274..158891313

Molecular Weight (calculated)

59159.2 Da

IEP (calculated)

10.117

GRAVY (calculated)

0.740

Length

572 amino acids

Sequence
(BLAST)

001: AVDAMASSAS AASPLTCHHL GIRHRPHLLS FSLRRRSTSS PSSKPTSLSL SHSHSYSLPK PLTPSTARRL LPPVAAAPAS PPAPVSPPAK PALKGAALKP
101: LLASIATGVI IWFIPAPAGV ARNAWQLLAV FLATIVGIIT QPLPLGAVAL LGLGAAVLTR TLTFAAAFSA FGDPIPWLIA LAFFFARGFI KTGLGNRVAY
201: QFVSAFGGST LGLGYSLVFA EAFLAPAIPS VSARAGGIFL PLVKSLCEAC GSRTDDGTER KLGAWLMLTC FQTSVISSAM FLTAMAANPL AANLTLSTIG
301: QGIGWTLWAK AAIVPGLLSL LIVPLVLYLI YPPEVKTSPD APRLAKERLA KMGPMSTEEK IMAGTLLLTV GLWIFGGMLS VDAVSAAILG LSVLLITGVV
401: TWKEXXXXXX XXXXLAESVA WDTLTWFAAL IAMAGYLNKY GLISWFSETV VKFVGGLGLS WQLSFGVLVL MYFYSHYFFA SGAAHIGAMF TAFLSVASAL
501: GTPPLFAAMV MSFLSNLMGG LTHYGIGSAP VFYGAGYVPL AEWWGYGFVI SVVNIIIWLG AGGFWWKMIG LW

Best Arabidopsis Sequence Match ( AT5G12860.1 )
(BLAST)

001: MASLALSGSC SLAFPLKSRS LSLPRPPSSS LNLTKPLRSL DSRFSLLKSP LPVSLRRRSS TLVKASSTVA SASSSPTPPL VPAPVPWQGA AIKPLLASIA
101: TGLILWFVPV PEGVTRNAWQ LLAIFLATIV GIITQPLPLG AVALMGLGAS VLTKTLTFAA AFSAFGDPIP WLIALAFFFA RGFIKTGLGN RVAYQFVRLF
201: GSSSLGLGYS LVFSEALLAP AIPSVSARAG GIFLPLVKSL CVACGSNVGD GTEHRLGSWL MLTCFQTSVI SSSMFLTAMA ANPLSANLAF NTIKQTIGWT
301: DWAKAAIVPG LVSLIVVPFL LYLIYPPTVK SSPDAPKLAQ EKLDKMGPMS KNELIMAATL FLTVGLWIFG AKLGVDAVTA AILGLSVLLV TGVVTWKECL
401: AESVAWDTLT WFAALIAMAG YLNKYGLIEW FSQTVVKFVG GLGLSWQLSF GILVLLYFYT HYFFASGAAH IGAMFTAFLS VSTALGTPPY FAALVLAFLS
501: NLMGGLTHYG IGSAPIFYGA NYVPLAKWWG YGFLISIVNI LIWLGVGGAW WKFIGLW

Arabidopsis Description

DIT1Dicarboxylate transporter 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LXV3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.