Factsheet for GSMUA_Achr7P27130_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P03580_001	Banana	plastid	75.18	80.04
Bra008876.1-P	Field mustard	extracellular, plasma membrane, vacuole	43.38	79.46
TraesCS5D01G113100.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	42.83	78.45
CDY53969	Canola	plastid	70.77	69.75
AT5G12860.1	Thale cress	plastid	71.14	69.48
VIT_06s0004g02120.t01	Wine grape	plastid	70.59	68.69
PGSC0003DMT400018994	Potato	plastid	69.67	68.41
Solyc11g065830.1.1	Tomato	plastid	69.67	68.29
KRH24714	Soybean	plastid	69.3	68.17
CDX97208	Canola	plastid	70.77	67.66
KRH29718	Soybean	plastid	69.12	67.14
Os12t0515400-01	Rice	plastid	67.46	66.97
TraesCS5A01G100600.1	Wheat	golgi, plastid	67.65	66.31
TraesCS5B01G105700.1	Wheat	plastid	67.65	66.07
Zm00001d023929_P001	Maize	plastid	68.57	64.53
HORVU5Hr1G027720.1	Barley	plastid	67.46	64.16
EES16067	Sorghum	plastid	66.54	61.99
GSMUA_Achr5P17890_001	Banana	mitochondrion, plasma membrane, plastid	25.18	40.65
GSMUA_Achr10P...	Banana	mitochondrion, plasma membrane, plastid	23.9	38.58
GSMUA_Achr10P...	Banana	mitochondrion	36.58	35.79

Protein Annotations

MapMan:24.2.7.1.2	InterPro:CitT-rel	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006814	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	EnsemblPlantsGene:GSMUA_Achr7G27130_001
EnsemblPlants:GSMUA_Achr7P27130_001	EnsemblPlants:GSMUA_Achr7T27130_001	UniProt:M0TL49	PFAM:PF00939	PIRSF:PIRSF002457	PANTHER:PTHR42826
PANTHER:PTHR42826:SF3	InterPro:SLC13A/DASS	TIGRFAMs:TIGR00785	TMHMM:TMhelix	UniParc:UPI0002962EE9	SEG:seg

Description

2-oxoglutarate/malate translocator, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr7G27130_001]

Coordinates

chr7:+:28260915..28269489

Molecular Weight (calculated)

57643.2 Da

IEP (calculated)

10.191

GRAVY (calculated)

0.662

Length

544 amino acids

Sequence
(BLAST)

001: MVLSPPRCCR SPPTFTCCSE AAPSGSPRRI RLQAPPAMTA SVLTCNLGFH SLPSFRCRRR RLLPQSLLPT TPASPFRQSS TLPSFPSAPH KPFPAGLTPT
101: SNHGRRSLIP VVRASASASA APAAAPAPWQ GAALKPLAAS IATGVILWLP LPLGAVALMG LGASVLTKTL TFAAAFSAFG DPIPWLIALA FFFARGFIKT
201: GLGNRVAYQF VSLFGSSSLG LGYSLVFSEA LLAPAIPSVS ARAGGIFLPL VKALCTACGS NVGDGTENRL GSWLMLTCFQ TSTIGWTDWA VAAFVPGLVS
301: LVVVPLLLYL IYPPTVKSSP DAPKLAREKL QKMGSMTKNE FIMAGTLLLT VGLWVFGGTL NVDAVTAAIL GLSVLLITGV VTWKECLAES VAWDTLTWFA
401: ALIAMAGYLN KYGLISWFSQ TVVKFVGGLG LSWQLSFGIL VLLYFYSHYL FASGAAHIGA MFTAFLSVAS ALGTPPLFAA MVLSFLSNLM GGLTHYGIGS
501: APVFYGANYV PLPKWWGYGF IVSVVNIIIW LGIGGFWWKT IGLW

Best Arabidopsis Sequence Match ( AT5G12860.1 )
(BLAST)

001: MASLALSGSC SLAFPLKSRS LSLPRPPSSS LNLTKPLRSL DSRFSLLKSP LPVSLRRRSS TLVKASSTVA SASSSPTPPL VPAPVPWQGA AIKPLLASIA
101: TGLILWFVPV PEGVTRNAWQ LLAIFLATIV GIITQPLPLG AVALMGLGAS VLTKTLTFAA AFSAFGDPIP WLIALAFFFA RGFIKTGLGN RVAYQFVRLF
201: GSSSLGLGYS LVFSEALLAP AIPSVSARAG GIFLPLVKSL CVACGSNVGD GTEHRLGSWL MLTCFQTSVI SSSMFLTAMA ANPLSANLAF NTIKQTIGWT
301: DWAKAAIVPG LVSLIVVPFL LYLIYPPTVK SSPDAPKLAQ EKLDKMGPMS KNELIMAATL FLTVGLWIFG AKLGVDAVTA AILGLSVLLV TGVVTWKECL
401: AESVAWDTLT WFAALIAMAG YLNKYGLIEW FSQTVVKFVG GLGLSWQLSF GILVLLYFYT HYFFASGAAH IGAMFTAFLS VSTALGTPPY FAALVLAFLS
501: NLMGGLTHYG IGSAPIFYGA NYVPLAKWWG YGFLISIVNI LIWLGVGGAW WKFIGLW

Arabidopsis Description

DIT1Dicarboxylate transporter 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LXV3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.