Factsheet for GSMUA_Achr10P30320_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P17890_001	Banana	mitochondrion, plasma membrane, plastid	51.98	85.76
Os09t0470000-01	Rice	endoplasmic reticulum, mitochondrion, plasma membrane	15.29	84.16
GSMUA_Achr10P...	Banana	mitochondrion, plasma membrane, plastid	50.9	83.98
Os08t0481800-01	Rice	plastid	34.35	79.92
TraesCS5A01G248900.1	Wheat	golgi, unclear	71.04	72.34
TraesCS5B01G246600.1	Wheat	plastid	70.86	71.64
Zm00001d005950_P001	Maize	plastid	71.22	71.48
TraesCS5D01G256100.1	Wheat	mitochondrion, plastid	70.32	71.09
EER96900	Sorghum	plastid	70.68	70.56
HORVU7Hr1G063220.1	Barley	plastid	70.32	70.32
EES15485	Sorghum	plastid	69.42	70.05
TraesCS7B01G199700.1	Wheat	plasma membrane, plastid	69.96	69.96
TraesCS7A01G285000.1	Wheat	golgi	69.78	69.78
TraesCS7D01G283000.1	Wheat	unclear	69.78	69.78
VIT_03s0017g00640.t01	Wine grape	plastid	70.14	69.15
HORVU5Hr1G070230.1	Barley	plastid	70.86	68.88
Bra024282.1-P	Field mustard	plastid	68.7	68.83
Zm00001d031253_P001	Maize	plastid	68.17	68.78
CDY43805	Canola	plastid	68.53	68.65
CDX81219	Canola	plastid	68.35	68.35
CDY18717	Canola	plastid	69.06	68.21
Bra037771.1-P	Field mustard	plastid	68.88	68.03
CDX84512	Canola	plastid	68.7	67.97
EES14336	Sorghum	golgi, plastid, vacuole	64.39	67.8
KRH10575	Soybean	plastid	68.53	67.79
EES04490	Sorghum	plastid	68.35	67.5
PGSC0003DMT400032652	Potato	plastid	70.86	67.47
KRH18862	Soybean	golgi, plasma membrane, vacuole	29.68	67.35
KRH43882	Soybean	endoplasmic reticulum, plastid	67.45	67.33
AT5G64290.1	Thale cress	plastid	67.99	67.14
Solyc01g105540.2.1	Tomato	plastid	68.35	66.67
Bra031926.1-P	Field mustard	plastid	61.51	61.51
CDY31328	Canola	plastid	60.79	60.68
AT5G64280.1	Thale cress	plastid	59.89	60.66
Os09t0469950-00	Rice	plasma membrane	30.4	59.93
PGSC0003DMT400017518	Potato	plastid	24.82	50.92
CDY46791	Canola	plasma membrane	59.53	50.38
Zm00001d020803_P001	Maize	peroxisome	12.23	40.96
GSMUA_Achr4P03580_001	Banana	plastid	36.87	40.12
GSMUA_Achr7P27130_001	Banana	plastid	35.79	36.58

Protein Annotations

EnsemblPlants:GSMUA_Achr10P30320_001	EnsemblPlants:GSMUA_Achr10T30320_001	EnsemblPlantsGene:GSMUA_Achr10G30320_001	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0006814	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
InterPro:CitT-rel	InterPro:SLC13A/DASS	PANTHER:PTHR42826	PANTHER:PTHR42826:SF1	PFAM:PF00939	SEG:seg
TIGRFAMs:TIGR00785	TMHMM:TMhelix	UniParc:UPI000296D217	UniProt:M0RMQ6	MapMan:24.2.7.1.2	:

Description

Putative 2-oxoglutarate/malate translocator, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr10G30320_001]

Coordinates

chr10:+:32546569..32555550

Molecular Weight (calculated)

60062.4 Da

IEP (calculated)

9.410

GRAVY (calculated)

0.540

Length

556 amino acids

Sequence
(BLAST)

001: MASPLAARPS ALLRRRPIPA LSRRRLISAT PLRPPPQPSA AYPPSIRHRR RRRPKPSLFP ARSSSSQSDS PNPASSPLPL PPPREGAKLI PLAISLAVGL
101: AIWFLVPTPA EVTPQAWQLL AIFLSTITGF ILGPLPIAAW AFLGLTASVA TKTLTFSAAF DAFENEVIWL IVISFFFARG FVKTGLGDRI ATFFVKWLGK
201: STLGLSYGLT FSEAFIAPAM PSTTARAGGV FLPIIQSLSL SAGSEPGDRS AGRLGSYLVM SQFQSSSNSS ALFLTAAAQN LLCLKLAEEL GIHIASPWLS
301: WFEAASLPAI ASLLVTPYIL YKIFPPEIKD TPDAPAIATK RLEEMGPATR NEWVMICTMV FAVSLWVFGD ALGISSVVAA MLGLSILLLF GVLNWDDCLS
401: EKSAWDTLAW FAVLVGMAEQ LTNLGIVTWM SNCVAESLQH FSLSWPAAFC ILQASYFFIH YLFASQTAHV GALYSAFLAM HLAAGVPSVL ATLALAYNTN
501: LFGALTHYSS GQAAVYFGVG YLDLPDIFRL GFITALINAL IWASVGTFWW KFLGLY

Best Arabidopsis Sequence Match ( AT5G64290.1 )
(BLAST)

001: MESFALHSLS TTATSTLLSH HHHHHPSRLS LLRRTSSRSP PSTISLRSLS VQPLSFPLLK PIPRFSTRIA AAPQDNAPPP PPPSPSPSPS PQGAKLIPLI
101: LSISVGLILR FAVPVPEGVT PQGWQLLSIF LSTIAGLVLS PLPVGAWAFI GLTASIVTKT LSFSAAFSAF TSEVIWLIVI SFFFARGFVK TGLGDRIATY
201: FVKWLGKSTL GLSYGLTLSE ALIAPAMPST TARAGGIFLP IIKSLSLSAG SKPNDSSSRK LGSYLIQSQF QCAGNSSALF LTAAAQNLLC LKLAEELGVV
301: ISNPWVSWFK AASLPAIISL LCTPLILYKL YPPETKDTPE APGIAATKLK QMGPVTKNEW IMVGTMLLAV TLWICGETLG IPSVVAAMIG LSILLVLGVL
401: NWDDCLSEKS AWDTLAWFAV LVGMAGQLTN LGVVTWMSDC VAKVLQSLSL SWPAAFGLLQ AAYFFIHYLF ASQTGHVGAL FSAFLAMHIA AGVPGILAAL
501: ALAYNTNLFG ALTHYSSGQA AVYYGAGYVD LPDVFKIGFV MATINAIIWG VVGTFWWKFL GLY

Arabidopsis Description

DIT2-1Dicarboxylate transporter 2.1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FMF7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.