Factsheet for TraesCS5B01G246600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 4
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G256100.1	Wheat	mitochondrion, plastid	96.73	96.73
TraesCS5A01G248900.1	Wheat	golgi, unclear	95.27	95.97
Os09t0470000-01	Rice	endoplasmic reticulum, mitochondrion, plasma membrane	17.27	94.06
HORVU5Hr1G070230.1	Barley	plastid	93.45	89.86
GSMUA_Achr5P17890_001	Banana	mitochondrion, plasma membrane, plastid	51.27	83.68
GSMUA_Achr10P...	Banana	mitochondrion, plasma membrane, plastid	50.55	82.49
Zm00001d005950_P001	Maize	plastid	81.64	81.05
EER96900	Sorghum	plastid	81.45	80.43
TraesCS7B01G199700.1	Wheat	plasma membrane, plastid	78.55	77.7
EES04490	Sorghum	plastid	76.55	74.78
KRH18862	Soybean	golgi, plasma membrane, vacuole	32.0	71.84
GSMUA_Achr10P...	Banana	mitochondrion	71.64	70.86
Bra024282.1-P	Field mustard	plastid	71.09	70.45
CDX81219	Canola	plastid	71.09	70.32
CDY43805	Canola	plastid	70.91	70.27
CDX84512	Canola	plastid	71.45	69.93
PGSC0003DMT400032652	Potato	plastid	74.18	69.86
AT5G64290.1	Thale cress	plastid	71.09	69.45
Solyc01g105540.2.1	Tomato	plastid	71.64	69.12
Bra037771.1-P	Field mustard	plastid	70.55	68.92
CDY18717	Canola	plastid	70.55	68.92
Os09t0469950-00	Rice	plasma membrane	35.09	68.44
VIT_03s0017g00640.t01	Wine grape	plastid	70.0	68.26
KRH43882	Soybean	endoplasmic reticulum, plastid	68.91	68.04
KRH10575	Soybean	plastid	68.91	67.44
AT5G64280.1	Thale cress	plastid	63.27	63.39
CDY31328	Canola	plastid	63.64	62.84
Bra031926.1-P	Field mustard	plastid	63.45	62.77
CDY46791	Canola	plasma membrane	63.45	53.12
PGSC0003DMT400017518	Potato	plastid	25.82	52.4
TraesCS5B01G105700.1	Wheat	plastid	41.64	41.11

Protein Annotations

EnsemblPlants:TraesCS5B01G246600.1	EnsemblPlantsGene:TraesCS5B01G246600	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006814	GO:GO:0008150	GO:GO:0016020	GO:GO:0055085	InterPro:CitT-rel	InterPro:SLC13A/DASS
PANTHER:PTHR42826	PANTHER:PTHR42826:SF4	PFAM:PF00939	SEG:seg	TIGRFAMs:TIGR00785	TMHMM:TMhelix
MapMan:24.2.7.1.2	:	:	:	:	:

Description

No Description!

Coordinates

chr5B:+:428127309..428131754

Molecular Weight (calculated)

58757.1 Da

IEP (calculated)

8.317

GRAVY (calculated)

0.641

Length

550 amino acids

Sequence
(BLAST)

001: MERLRVAVSH RPPLLLPAPS HLHRRQLHLP APLASRPLSS RHRLLSPAPR RHARHLLASQ TPSPESGPEP DAAASAAPDG AKLVPLVVSL AAGLAVRFLA
101: PRPAEVTLQA WQLLSIFLST IAGLVLGPLP VGAWAFLGLT TAVATRTLPF ETAFSAFTNE VIWLIVISFF FARGFVKTGL GDRIATYFIK WLGGSTLGLS
201: YGLTVSEACI APAMPSTTAR AGGVFLPIIQ SLSLSAGSEP NDPSSRKLGS YLVMTQFQAA CNSSALFLTA AAQNLLCLKL AEELGIIVAN PWVSWFQAAS
301: LPAIVSLLAT PYLLYKIFPP EIKDTPEAPA LAAEKLKLMG PVTKNEWVMI GTMILAVSLW IFGDAIGVSS VVAAMLGLSI LLLLGVLDWD DCLSEKSAWD
401: TLSWFAVLVA MAGQLTDLGI VSWMSTSVAK LLESFSLSWP AAFVVLEASY FLIHYLFASQ TGHVGALYSA FLAMHLAAGV PGVLSALALA FNTNLFGALT
501: HYSSGQAAVY FGAGYLELPD IFRLGFVTAL INALIWGVVG TFWWKFLGLY

Best Arabidopsis Sequence Match ( AT5G64280.1 )
(BLAST)

001: MESLALRSIS LSASYLSLHR SSSKSFALLP PSISVHTSPT LRSLSISSPR FTLRATASSL PEEQNKPQPP PPSPPQPQGA KLIPLAISVS IGLIVRFLIP
101: RPEQVTSQGW QLLSIFLFTI SGLVLGPLPV GAWAFIGLTA SIVTKTLPFS TAFAAFTNEL IWLIAISFFF ARGFIKTGLG DRIATYFVKW LGKSTLGLSY
201: GLAFCETLMG LIMPSTMARA GGVFLPVIKS LAISAGSYPG DPSSRKLGSF LIQTQLQCSG ASGAILLTSA AQNLLCLKLA REVGVVISNP WITWFKVASV
301: PAFVSLLCTP LIIYKLYPPE LKHTPEAPAA AAKKLERLGP ITKNEWIMLG AMAFTVSLWV FGEAIGIASV VSAMIGLSTL LLLGVINWDD CLSDKSAWDS
401: LTWFAVLIGM AGQLTNLGVV AWMSDCVAKL LQSLSLTWPA SFIILQACYL LIHYLFASQT GHAGALYPPF LAMQIAAGVP GVLAALCLAF NNNLSGALAH
501: YSGGPAALYY GAGYVDLRDM FRVGFVMALV QAIIWGGVGS FWWKFLGLY

Arabidopsis Description

DIT2-2Dicarboxylate transporter 2.2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FMF8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.