Factsheet for Os09t0470000-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, plasma membrane

Predictor Summary:

extracellular 2
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, mitochondrion, plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
PProwler:	secretory
TargetP:	mitochondrion
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0481800-01	Rice	plastid	80.2	33.89
GSMUA_Achr10P...	Banana	mitochondrion, plasma membrane, plastid	87.13	26.11
GSMUA_Achr5P17890_001	Banana	mitochondrion, plasma membrane, plastid	84.16	25.22
TraesCS5D01G256100.1	Wheat	mitochondrion, plastid	94.06	17.27
TraesCS5B01G246600.1	Wheat	plastid	94.06	17.27
TraesCS5A01G248900.1	Wheat	golgi, unclear	93.07	17.22
KRH18862	Soybean	golgi, plasma membrane, vacuole	40.59	16.73
HORVU5Hr1G070230.1	Barley	plastid	94.06	16.61
Zm00001d005950_P001	Maize	plastid	90.1	16.43
EER96900	Sorghum	plastid	90.1	16.34
GSMUA_Achr10P...	Banana	mitochondrion	84.16	15.29
EES04490	Sorghum	plastid	85.15	15.28
CDX81219	Canola	plastid	83.17	15.11
Solyc01g105540.2.1	Tomato	plastid	85.15	15.09
CDY43805	Canola	plastid	82.18	14.96
Bra024282.1-P	Field mustard	plastid	82.18	14.96
CDY18717	Canola	plastid	83.17	14.92
Bra037771.1-P	Field mustard	plastid	83.17	14.92
AT5G64290.1	Thale cress	plastid	83.17	14.92
PGSC0003DMT400032652	Potato	plastid	86.14	14.9
CDX84512	Canola	plastid	82.18	14.77
VIT_03s0017g00640.t01	Wine grape	plastid	82.18	14.72
KRH10575	Soybean	plastid	79.21	14.23
KRH43882	Soybean	endoplasmic reticulum, plastid	78.22	14.18
AT5G64280.1	Thale cress	plastid	71.29	13.11
Bra031926.1-P	Field mustard	plastid	69.31	12.59
CDY31328	Canola	plastid	69.31	12.57
CDY46791	Canola	plasma membrane	69.31	10.65
Os12t0515400-01	Rice	plastid	46.53	8.58
PGSC0003DMT400017518	Potato	plastid	0.0	0.0
Os09t0469950-00	Rice	plasma membrane	0.0	0.0

Protein Annotations

EnsemblPlants:Os09t0470000-01	EnsemblPlantsGene:Os09g0470000	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006814	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:CitT-rel
InterPro:SLC13A/DASS	PANTHER:PTHR42826	PANTHER:PTHR42826:SF1	PFAM:PF00939	ProteinID:BAF25349.1	ProteinID:BAT08547.1
TMHMM:TMhelix	UniParc:UPI0000DD9773	UniProt:Q0J116	MapMan:24.2.7.1.2	:	:

Description

Similar to Plastidic general dicarboxylate transporter. (Os09t0470000-01)

Coordinates

chr9:+:17884858..17885624

Molecular Weight (calculated)

11051.6 Da

IEP (calculated)

8.845

GRAVY (calculated)

0.928

Length

101 amino acids

Sequence
(BLAST)

001: YFLIHYLFAS QTGHVGALYS AFLAMHVAAG VPRVLSALAL AFNTNLFGAL THYSSGQAAV YFGAGYLELP DVFRMGFVTA LINILIWGVV GTFWWKLLGL
101: Y

Best Arabidopsis Sequence Match ( AT5G64290.1 )
(BLAST)

001: MESFALHSLS TTATSTLLSH HHHHHPSRLS LLRRTSSRSP PSTISLRSLS VQPLSFPLLK PIPRFSTRIA AAPQDNAPPP PPPSPSPSPS PQGAKLIPLI
101: LSISVGLILR FAVPVPEGVT PQGWQLLSIF LSTIAGLVLS PLPVGAWAFI GLTASIVTKT LSFSAAFSAF TSEVIWLIVI SFFFARGFVK TGLGDRIATY
201: FVKWLGKSTL GLSYGLTLSE ALIAPAMPST TARAGGIFLP IIKSLSLSAG SKPNDSSSRK LGSYLIQSQF QCAGNSSALF LTAAAQNLLC LKLAEELGVV
301: ISNPWVSWFK AASLPAIISL LCTPLILYKL YPPETKDTPE APGIAATKLK QMGPVTKNEW IMVGTMLLAV TLWICGETLG IPSVVAAMIG LSILLVLGVL
401: NWDDCLSEKS AWDTLAWFAV LVGMAGQLTN LGVVTWMSDC VAKVLQSLSL SWPAAFGLLQ AAYFFIHYLF ASQTGHVGAL FSAFLAMHIA AGVPGILAAL
501: ALAYNTNLFG ALTHYSSGQA AVYYGAGYVD LPDVFKIGFV MATINAIIWG VVGTFWWKFL GLY

Arabidopsis Description

DIT2-1Dicarboxylate transporter 2.1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FMF7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.