Factsheet for GSMUA_Achr10P24820_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, plastid

Predictor Summary:

plastid 3
mitochondrion 2
vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plasma membrane, plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P17890_001	Banana	mitochondrion, plasma membrane, plastid	92.88	92.88
Os09t0470000-01	Rice	endoplasmic reticulum, mitochondrion, plasma membrane	26.11	87.13
Os08t0481800-01	Rice	plastid	56.97	80.33
KRH18862	Soybean	golgi, plasma membrane, vacuole	50.45	69.39
TraesCS5A01G248900.1	Wheat	golgi, unclear	82.49	50.92
GSMUA_Achr10P...	Banana	mitochondrion	83.98	50.9
Zm00001d005950_P001	Maize	plastid	83.38	50.72
TraesCS5B01G246600.1	Wheat	plastid	82.49	50.55
TraesCS5D01G256100.1	Wheat	mitochondrion, plastid	82.49	50.55
CDY43805	Canola	plastid	83.09	50.45
Bra024282.1-P	Field mustard	plastid	83.09	50.45
CDX81219	Canola	plastid	82.79	50.18
Solyc01g105540.2.1	Tomato	plastid	84.87	50.18
CDX84512	Canola	plastid	83.09	49.82
VIT_03s0017g00640.t01	Wine grape	plastid	83.09	49.65
HORVU7Hr1G063220.1	Barley	plastid	81.9	49.64
AT5G64290.1	Thale cress	plastid	82.79	49.56
Bra037771.1-P	Field mustard	plastid	82.79	49.56
EER96900	Sorghum	plastid	81.9	49.55
TraesCS7D01G283000.1	Wheat	unclear	81.6	49.46
TraesCS7B01G199700.1	Wheat	plasma membrane, plastid	81.6	49.46
TraesCS7A01G285000.1	Wheat	golgi	81.6	49.46
CDY18717	Canola	plastid	82.49	49.38
PGSC0003DMT400032652	Potato	plastid	84.57	48.8
HORVU5Hr1G070230.1	Barley	plastid	82.2	48.43
KRH43882	Soybean	endoplasmic reticulum, plastid	79.53	48.11
EES15485	Sorghum	plastid	78.34	47.91
EES14336	Sorghum	golgi, plastid, vacuole	74.78	47.73
KRH10575	Soybean	plastid	79.23	47.51
Zm00001d031253_P001	Maize	plastid	76.85	47.01
EES04490	Sorghum	plastid	77.74	46.54
AT5G64280.1	Thale cress	plastid	70.92	43.53
Bra031926.1-P	Field mustard	plastid	70.92	42.99
CDY31328	Canola	plastid	70.92	42.91
Zm00001d020803_P001	Maize	peroxisome	19.29	39.16
CDY46791	Canola	plasma membrane	70.92	36.38
GSMUA_Achr4P03580_001	Banana	plastid	40.65	26.81
GSMUA_Achr7P27130_001	Banana	plastid	38.58	23.9
Os09t0469950-00	Rice	plasma membrane	12.17	14.54
PGSC0003DMT400017518	Potato	plastid	5.93	7.38

Protein Annotations

EnsemblPlants:GSMUA_Achr10P24820_001	EnsemblPlants:GSMUA_Achr10T24820_001	EnsemblPlantsGene:GSMUA_Achr10G24820_001	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0006814	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
InterPro:CitT-rel	InterPro:SLC13A/DASS	PANTHER:PTHR42826	PANTHER:PTHR42826:SF4	PFAM:PF00939	SEG:seg
TIGRFAMs:TIGR00785	TMHMM:TMhelix	UniParc:UPI000296AC33	UniProt:M0RL57	MapMan:24.2.7.1.2	:

Description

Putative 2-oxoglutarate/malate translocator, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr10G24820_001]

Coordinates

chr10:-:29092365..29096674

Molecular Weight (calculated)

35994.5 Da

IEP (calculated)

8.577

GRAVY (calculated)

0.735

Length

337 amino acids

Sequence
(BLAST)

001: MPSTTARAGG VFLPIIKSLS LQSGSKPGDQ SAGKLGSFLI MSQLQSAGNS SALFLTAAAQ NLLCLKLAEE LGVRISSPWV SWFKAASLPA IVSLLATPFI
101: LYKLFPPQVK DTPDAPALAT KKLEQMGPVT TNEWAMVVTM VLAVSLWVFG DALGIPSVVA AMLGLSILLL LGVLNWDDCL SEKSAWDTLA WFAVLVGMAG
201: QLTKLGIVTW MSNCVAKLLQ SFSLSWPAAL CVLQASYFLI HYLFASQTGH VGALYSAFLA MHLAAGVPGV LAALALAYNT NLFGALTHYS SGQAAVYYGA
301: GYVELPDVFR LGFIVALINA LMWGVVGTFW WKFLRLY

Best Arabidopsis Sequence Match ( AT5G64290.1 )
(BLAST)

001: MESFALHSLS TTATSTLLSH HHHHHPSRLS LLRRTSSRSP PSTISLRSLS VQPLSFPLLK PIPRFSTRIA AAPQDNAPPP PPPSPSPSPS PQGAKLIPLI
101: LSISVGLILR FAVPVPEGVT PQGWQLLSIF LSTIAGLVLS PLPVGAWAFI GLTASIVTKT LSFSAAFSAF TSEVIWLIVI SFFFARGFVK TGLGDRIATY
201: FVKWLGKSTL GLSYGLTLSE ALIAPAMPST TARAGGIFLP IIKSLSLSAG SKPNDSSSRK LGSYLIQSQF QCAGNSSALF LTAAAQNLLC LKLAEELGVV
301: ISNPWVSWFK AASLPAIISL LCTPLILYKL YPPETKDTPE APGIAATKLK QMGPVTKNEW IMVGTMLLAV TLWICGETLG IPSVVAAMIG LSILLVLGVL
401: NWDDCLSEKS AWDTLAWFAV LVGMAGQLTN LGVVTWMSDC VAKVLQSLSL SWPAAFGLLQ AAYFFIHYLF ASQTGHVGAL FSAFLAMHIA AGVPGILAAL
501: ALAYNTNLFG ALTHYSSGQA AVYYGAGYVD LPDVFKIGFV MATINAIIWG VVGTFWWKFL GLY

Arabidopsis Description

DIT2-1Dicarboxylate transporter 2.1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FMF7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.