Subcellular Localization
min:
: max
Winner_takes_all: golgi, plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- golgi 2
- extracellular 1
- plasma membrane 2
- endoplasmic reticulum 1
- vacuole 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os08t0481800-01 | Rice | plastid | 59.59 | 61.09 |
| GSMUA_Achr5P17890_001 | Banana | mitochondrion, plasma membrane, plastid | 70.2 | 51.04 |
| GSMUA_Achr10P... | Banana | mitochondrion, plasma membrane, plastid | 69.39 | 50.45 |
| Os09t0470000-01 | Rice | endoplasmic reticulum, mitochondrion, plasma membrane | 16.73 | 40.59 |
| KRH43882 | Soybean | endoplasmic reticulum, plastid | 87.76 | 38.6 |
| KRH10575 | Soybean | plastid | 86.53 | 37.72 |
| Bra024282.1-P | Field mustard | plastid | 74.69 | 32.97 |
| CDY43805 | Canola | plastid | 74.69 | 32.97 |
| CDX81219 | Canola | plastid | 74.69 | 32.91 |
| CDX84512 | Canola | plastid | 75.1 | 32.74 |
| AT5G64290.1 | Thale cress | plastid | 75.1 | 32.68 |
| CDY18717 | Canola | plastid | 74.69 | 32.5 |
| Bra037771.1-P | Field mustard | plastid | 74.69 | 32.5 |
| TraesCS5A01G248900.1 | Wheat | golgi, unclear | 71.43 | 32.05 |
| TraesCS5B01G246600.1 | Wheat | plastid | 71.84 | 32.0 |
| Solyc01g105540.2.1 | Tomato | plastid | 73.88 | 31.75 |
| TraesCS5D01G256100.1 | Wheat | mitochondrion, plastid | 71.02 | 31.64 |
| Zm00001d005950_P001 | Maize | plastid | 71.43 | 31.59 |
| VIT_03s0017g00640.t01 | Wine grape | plastid | 72.65 | 31.56 |
| TraesCS7D01G283000.1 | Wheat | unclear | 71.43 | 31.47 |
| HORVU7Hr1G063220.1 | Barley | plastid | 71.43 | 31.47 |
| TraesCS7B01G199700.1 | Wheat | plasma membrane, plastid | 71.43 | 31.47 |
| TraesCS7A01G285000.1 | Wheat | golgi | 71.43 | 31.47 |
| PGSC0003DMT400032652 | Potato | plastid | 74.29 | 31.16 |
| Zm00001d031253_P001 | Maize | plastid | 69.8 | 31.03 |
| EES15485 | Sorghum | plastid | 69.8 | 31.03 |
| EER96900 | Sorghum | plastid | 70.2 | 30.88 |
| EES14336 | Sorghum | golgi, plastid, vacuole | 66.53 | 30.87 |
| EES04490 | Sorghum | plastid | 70.61 | 30.73 |
| HORVU5Hr1G070230.1 | Barley | plastid | 70.61 | 30.24 |
| GSMUA_Achr10P... | Banana | mitochondrion | 67.35 | 29.68 |
| AT5G64280.1 | Thale cress | plastid | 64.08 | 28.6 |
| Bra031926.1-P | Field mustard | plastid | 62.45 | 27.52 |
| CDY31328 | Canola | plastid | 62.45 | 27.47 |
| Zm00001d020803_P001 | Maize | peroxisome | 17.14 | 25.3 |
| CDY46791 | Canola | plasma membrane | 62.45 | 23.29 |
| KRH24714 | Soybean | plastid | 35.1 | 15.55 |
| KRH29718 | Soybean | plastid | 34.69 | 15.18 |
| Os09t0469950-00 | Rice | plasma membrane | 5.71 | 4.96 |
| PGSC0003DMT400017518 | Potato | plastid | 2.86 | 2.58 |
Protein Annotations
| MapMan:24.2.7.1.2 | UniProt:A0A0R0GKA7 | EMBL:ACUP02008139 | InterPro:CitT-rel | EnsemblPlantsGene:GLYMA_13G086700 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006814 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0055085 | EnsemblPlants:KRH18862 | ProteinID:KRH18862 | ProteinID:KRH18862.1 | PFAM:PF00939 |
| PANTHER:PTHR42826 | PANTHER:PTHR42826:SF1 | InterPro:SLC13A/DASS | TMHMM:TMhelix | UniParc:UPI0006EDE572 | SEG:seg |
Description
hypothetical protein
Coordinates
chr13:+:19875794..19878682
Molecular Weight (calculated)
26488.2 Da
IEP (calculated)
8.267
GRAVY (calculated)
0.773
Length
245 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLPLAQGGK CFRGKECIST RLKIYCLKLA EELGVIVPNP WVTCFKAASL PAIVCLLMPL ILYKLYPPEI KDTPEAPALA AKKLESMGLV IKNEWIMVGT
101: MLLAVSLWIF GIASAVAAMI GLSILLLLGV LDWNNCWNEK SAWDTLAWFA ILVGMASQLT NLGYVSWMSD CVANNLRSFS LSWPASVAVL QAAYFFIHYL
201: FASQTGHVGA LYSAVLAMHK AGGVPGILAA LALGYNTNLF GAITL
101: MLLAVSLWIF GIASAVAAMI GLSILLLLGV LDWNNCWNEK SAWDTLAWFA ILVGMASQLT NLGYVSWMSD CVANNLRSFS LSWPASVAVL QAAYFFIHYL
201: FASQTGHVGA LYSAVLAMHK AGGVPGILAA LALGYNTNLF GAITL
001: MESFALHSLS TTATSTLLSH HHHHHPSRLS LLRRTSSRSP PSTISLRSLS VQPLSFPLLK PIPRFSTRIA AAPQDNAPPP PPPSPSPSPS PQGAKLIPLI
101: LSISVGLILR FAVPVPEGVT PQGWQLLSIF LSTIAGLVLS PLPVGAWAFI GLTASIVTKT LSFSAAFSAF TSEVIWLIVI SFFFARGFVK TGLGDRIATY
201: FVKWLGKSTL GLSYGLTLSE ALIAPAMPST TARAGGIFLP IIKSLSLSAG SKPNDSSSRK LGSYLIQSQF QCAGNSSALF LTAAAQNLLC LKLAEELGVV
301: ISNPWVSWFK AASLPAIISL LCTPLILYKL YPPETKDTPE APGIAATKLK QMGPVTKNEW IMVGTMLLAV TLWICGETLG IPSVVAAMIG LSILLVLGVL
401: NWDDCLSEKS AWDTLAWFAV LVGMAGQLTN LGVVTWMSDC VAKVLQSLSL SWPAAFGLLQ AAYFFIHYLF ASQTGHVGAL FSAFLAMHIA AGVPGILAAL
501: ALAYNTNLFG ALTHYSSGQA AVYYGAGYVD LPDVFKIGFV MATINAIIWG VVGTFWWKFL GLY
101: LSISVGLILR FAVPVPEGVT PQGWQLLSIF LSTIAGLVLS PLPVGAWAFI GLTASIVTKT LSFSAAFSAF TSEVIWLIVI SFFFARGFVK TGLGDRIATY
201: FVKWLGKSTL GLSYGLTLSE ALIAPAMPST TARAGGIFLP IIKSLSLSAG SKPNDSSSRK LGSYLIQSQF QCAGNSSALF LTAAAQNLLC LKLAEELGVV
301: ISNPWVSWFK AASLPAIISL LCTPLILYKL YPPETKDTPE APGIAATKLK QMGPVTKNEW IMVGTMLLAV TLWICGETLG IPSVVAAMIG LSILLVLGVL
401: NWDDCLSEKS AWDTLAWFAV LVGMAGQLTN LGVVTWMSDC VAKVLQSLSL SWPAAFGLLQ AAYFFIHYLF ASQTGHVGAL FSAFLAMHIA AGVPGILAAL
501: ALAYNTNLFG ALTHYSSGQA AVYYGAGYVD LPDVFKIGFV MATINAIIWG VVGTFWWKFL GLY
Arabidopsis Description
DIT2-1Dicarboxylate transporter 2.1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FMF7]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.