Factsheet for PGSC0003DMT400032652

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g105540.2.1	Tomato	plastid	95.21	97.54
PGSC0003DMT400017518	Potato	plastid	45.21	97.42
Os09t0470000-01	Rice	endoplasmic reticulum, mitochondrion, plasma membrane	14.9	86.14
GSMUA_Achr5P17890_001	Banana	mitochondrion, plasma membrane, plastid	49.49	85.76
GSMUA_Achr10P...	Banana	mitochondrion, plasma membrane, plastid	48.8	84.57
Os08t0481800-01	Rice	plastid	32.71	79.92
Bra037771.1-P	Field mustard	plastid	74.49	77.26
CDY18717	Canola	plastid	74.49	77.26
Bra024282.1-P	Field mustard	plastid	73.29	77.12
AT5G64290.1	Thale cress	plastid	74.32	77.09
CDX81219	Canola	plastid	73.29	76.98
CDY43805	Canola	plastid	73.12	76.94
CDX84512	Canola	plastid	72.95	75.8
TraesCS5A01G248900.1	Wheat	golgi, unclear	70.55	75.46
Zm00001d005950_P001	Maize	plastid	71.06	74.91
KRH18862	Soybean	golgi, plasma membrane, vacuole	31.16	74.29
TraesCS5B01G246600.1	Wheat	plastid	69.86	74.18
TraesCS5D01G256100.1	Wheat	mitochondrion, plastid	69.86	74.18
VIT_03s0017g00640.t01	Wine grape	plastid	71.4	73.94
EER96900	Sorghum	plastid	70.38	73.79
KRH10575	Soybean	plastid	70.72	73.49
KRH43882	Soybean	endoplasmic reticulum, plastid	69.86	73.25
TraesCS7D01G283000.1	Wheat	unclear	68.66	72.12
TraesCS7B01G199700.1	Wheat	plasma membrane, plastid	68.66	72.12
TraesCS7A01G285000.1	Wheat	golgi	68.66	72.12
HORVU7Hr1G063220.1	Barley	plastid	67.98	71.4
GSMUA_Achr10P...	Banana	mitochondrion	67.47	70.86
HORVU5Hr1G070230.1	Barley	plastid	68.66	70.1
EES15485	Sorghum	plastid	66.1	70.05
Zm00001d031253_P001	Maize	plastid	65.75	69.69
EES04490	Sorghum	plastid	66.95	69.45
EES14336	Sorghum	golgi, plastid, vacuole	62.5	69.13
AT5G64280.1	Thale cress	plastid	64.04	68.12
PGSC0003DMT400041649	Potato	plastid	57.53	66.14
CDY31328	Canola	plastid	62.84	65.89
Bra031926.1-P	Field mustard	plastid	62.5	65.65
Os09t0469950-00	Rice	plasma membrane	29.11	60.28
CDY46791	Canola	plasma membrane	62.84	55.86
Zm00001d020803_P001	Maize	peroxisome	12.5	43.98
PGSC0003DMT400018994	Potato	plastid	39.73	41.88

Protein Annotations

EntrezGene:102600931	MapMan:24.2.7.1.2	InterPro:CitT-rel	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0006814	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
UniProt:M1AXS6	PFAM:PF00939	EnsemblPlantsGene:PGSC0003DMG400012543	PGSC:PGSC0003DMG400012543	EnsemblPlants:PGSC0003DMT400032652	PANTHER:PTHR42826
PANTHER:PTHR42826:SF1	InterPro:SLC13A/DASS	TIGRFAMs:TIGR00785	TMHMM:TMhelix	UniParc:UPI0002950D51	RefSeq:XP_006351757.1
SEG:seg	:	:	:	:	:

Description

Glutamate/malate translocator [Source:PGSC_GENE;Acc:PGSC0003DMG400012543]

Coordinates

chr1:-:82184344..82190375

Molecular Weight (calculated)

62319.5 Da

IEP (calculated)

10.034

GRAVY (calculated)

0.581

Length

584 amino acids

Sequence
(BLAST)

001: MERLALHSPS SATSAAAAAT TSFSRLSYHH LRSRSSAIPT AALRPVSSLR SSISGSRFNL TGPRFNLFHP KPFLFNPLSK PTSRNPPSPK PITASSSPES
101: DKIVIVDVKP KPQGAKLIPL IISVSIGLIV RFLVPRPPEV SPQAWQLLSI FLSTIAGLVL SPLPVGAWAF LGLTTSVLTK TLTFSSAFSA FTNEVIWLIV
201: ISFFFARGFV KTGLGDRIAT YFVKWLGKST LGLSYGLTLA EALIAPAMPS TTARAGGVFL PIIKSLSLSA GSKPGDPSSR KLGSYLIQSQ FQCAGNSSAL
301: FLTAAAQNLL CLKLAEELGV VIANPWVSWF KAASLPAFIS LLATPFILYK LYPPETKDTP EAPAMAAKKL ELMGPVTKNE WVMIGTMLLA VSLWVFGDAL
401: GIASVVAAML GLSILLLLGV LDWDDCLSEK SAWDTLAWFA VLVGMASQLT NLGIVGWMSS CVAKSLQALS LSWPAAFGVL QVSYFCIHYL FASQTGHVGA
501: LYSAFLAMHL ASGVPGVLSA LALAYNTNLF GALTHYSSGQ AAVYFGAGYV DLPDVFKMGF VMAVVNAIIW GVVGTFWWKF LGLY

Best Arabidopsis Sequence Match ( AT5G64290.1 )
(BLAST)

001: MESFALHSLS TTATSTLLSH HHHHHPSRLS LLRRTSSRSP PSTISLRSLS VQPLSFPLLK PIPRFSTRIA AAPQDNAPPP PPPSPSPSPS PQGAKLIPLI
101: LSISVGLILR FAVPVPEGVT PQGWQLLSIF LSTIAGLVLS PLPVGAWAFI GLTASIVTKT LSFSAAFSAF TSEVIWLIVI SFFFARGFVK TGLGDRIATY
201: FVKWLGKSTL GLSYGLTLSE ALIAPAMPST TARAGGIFLP IIKSLSLSAG SKPNDSSSRK LGSYLIQSQF QCAGNSSALF LTAAAQNLLC LKLAEELGVV
301: ISNPWVSWFK AASLPAIISL LCTPLILYKL YPPETKDTPE APGIAATKLK QMGPVTKNEW IMVGTMLLAV TLWICGETLG IPSVVAAMIG LSILLVLGVL
401: NWDDCLSEKS AWDTLAWFAV LVGMAGQLTN LGVVTWMSDC VAKVLQSLSL SWPAAFGLLQ AAYFFIHYLF ASQTGHVGAL FSAFLAMHIA AGVPGILAAL
501: ALAYNTNLFG ALTHYSSGQA AVYYGAGYVD LPDVFKIGFV MATINAIIWG VVGTFWWKFL GLY

Arabidopsis Description

DIT2-1Dicarboxylate transporter 2.1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FMF7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.