Factsheet for Zm00001d031253_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 4
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

plastid: 20089766
plastid: 22065420
plastid: 23198870
plasma membrane: 27341663

msms PMID: 20089766 doi

G Friso, W Majeran, M Huang, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES15485	Sorghum	plastid	92.92	92.92
Os08t0481800-01	Rice	plastid	39.38	90.8
EES14336	Sorghum	golgi, plastid, vacuole	80.4	83.9
GSMUA_Achr5P17890_001	Banana	mitochondrion, plasma membrane, plastid	48.46	79.23
GSMUA_Achr10P...	Banana	mitochondrion, plasma membrane, plastid	47.01	76.85
Zm00001d005950_P001	Maize	plastid	75.5	75.09
KRH18862	Soybean	golgi, plasma membrane, vacuole	31.03	69.8
CDX81219	Canola	plastid	70.05	69.42
Bra024282.1-P	Field mustard	plastid	69.69	69.19
AT5G64290.1	Thale cress	plastid	70.6	69.09
CDY43805	Canola	plastid	69.51	69.01
CDX84512	Canola	plastid	70.05	68.68
KRH43882	Soybean	endoplasmic reticulum, plastid	69.15	68.4
Bra037771.1-P	Field mustard	plastid	69.87	68.38
CDY18717	Canola	plastid	69.87	68.38
GSMUA_Achr10P...	Banana	mitochondrion	68.78	68.17
KRH10575	Soybean	plastid	69.51	68.15
VIT_03s0017g00640.t01	Wine grape	plastid	67.51	65.96
PGSC0003DMT400032652	Potato	plastid	69.69	65.75
Solyc01g105540.2.1	Tomato	plastid	67.88	65.61
Bra031926.1-P	Field mustard	plastid	62.98	62.41
CDY31328	Canola	plastid	62.98	62.3
AT5G64280.1	Thale cress	plastid	61.52	61.75
CDY46791	Canola	plasma membrane	61.16	51.29
PGSC0003DMT400017518	Potato	plastid	25.23	51.29
Zm00001d033124_P001	Maize	mitochondrion, plastid	8.89	49.0
Zm00001d020803_P001	Maize	peroxisome	12.52	41.57
Zm00001d023929_P001	Maize	plastid	39.56	37.72

Protein Annotations

MapMan:24.2.7.1.2	EntrezGene:541644	EMBL:AB112938	EMBL:BT064759	InterPro:CitT-rel	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006814	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	ProteinID:ONM02507.1	PFAM:PF00939	PANTHER:PTHR42826	PANTHER:PTHR42826:SF4
UniProt:Q768R3	InterPro:SLC13A/DASS	TIGRFAMs:TIGR00785	TMHMM:TMhelix	UniParc:UPI000022DE24	EnsemblPlantsGene:Zm00001d031253
EnsemblPlants:Zm00001d031253_P001	EnsemblPlants:Zm00001d031253_T001	SEG:seg	:	:	:

Description

dicarboxylic acid transporter2 dicarboxylic acid transporter2

Coordinates

chr1:-:183880314..183892062

Molecular Weight (calculated)

58604.0 Da

IEP (calculated)

9.947

GRAVY (calculated)

0.636

Length

551 amino acids

Sequence
(BLAST)

001: MESLRLAVTH RPALPLPTSH SHLRRRHLHL HLHSYPNPLS LSPPIASHLS PIPRRHLPPL LASASASQAS SKPAASAASG GAKPLPLFLS LAAGLAVRFL
101: VPRPAEVTPE AWQLLSIFLS TIAGLVLGPL PVGAWAFLGL TATVATRTLP FTAAFGAFTN EVIWLIVISF FFARGFVKTG LGDRVATYFV KWLGRSTLGL
201: SYGLAISEAL ISPAMPSTTA RAGGVFLPIV KSLSLSSGSK PNDPSAKKLG SYLVQSQLQA AANSSALFLT AAAQNLLCLK LAEEIGVSIG NPWITWFKVS
301: SVPAVLGLLV TPYLIYKIFP PEIKDTPEAP ALAAEKLKNM GPVTKNEWVM IGTMLLAVSL WIFGETIGVS SVVAAMIGLS ILLVLGVLNW EDCLNEKSAW
401: DTLAWFAILV GLAGQLTNLG IVSWMSNCVA KVLQSFSLSW PAAFVVLQAS YFFIHYIFAS QTAHVGALYS AFLAMHLAAG VPALMSALAL AYNANLFGAL
501: THYSSGQSAV YFGAGYVDLP DVFKLGFITA AINAVIWGVA GALWWKFLGL Y

Best Arabidopsis Sequence Match ( AT5G64290.1 )
(BLAST)

001: MESFALHSLS TTATSTLLSH HHHHHPSRLS LLRRTSSRSP PSTISLRSLS VQPLSFPLLK PIPRFSTRIA AAPQDNAPPP PPPSPSPSPS PQGAKLIPLI
101: LSISVGLILR FAVPVPEGVT PQGWQLLSIF LSTIAGLVLS PLPVGAWAFI GLTASIVTKT LSFSAAFSAF TSEVIWLIVI SFFFARGFVK TGLGDRIATY
201: FVKWLGKSTL GLSYGLTLSE ALIAPAMPST TARAGGIFLP IIKSLSLSAG SKPNDSSSRK LGSYLIQSQF QCAGNSSALF LTAAAQNLLC LKLAEELGVV
301: ISNPWVSWFK AASLPAIISL LCTPLILYKL YPPETKDTPE APGIAATKLK QMGPVTKNEW IMVGTMLLAV TLWICGETLG IPSVVAAMIG LSILLVLGVL
401: NWDDCLSEKS AWDTLAWFAV LVGMAGQLTN LGVVTWMSDC VAKVLQSLSL SWPAAFGLLQ AAYFFIHYLF ASQTGHVGAL FSAFLAMHIA AGVPGILAAL
501: ALAYNTNLFG ALTHYSSGQA AVYYGAGYVD LPDVFKIGFV MATINAIIWG VVGTFWWKFL GLY

Arabidopsis Description

DIT2-1Dicarboxylate transporter 2.1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FMF7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.