Factsheet for Zm00001d023929_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

plastid: 20089766
extracellular: 20408568
plastid: 22065420
plastid: 23198870

msms PMID: 20089766 doi

G Friso, W Majeran, M Huang, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G113100.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	47.06	91.58
EES16067	Sorghum	plastid	84.78	83.9
Os12t0515400-01	Rice	plastid	78.03	82.3
Bra008876.1-P	Field mustard	extracellular, plasma membrane, vacuole	41.7	81.14
TraesCS5A01G100600.1	Wheat	golgi, plastid	77.16	80.36
TraesCS5B01G105700.1	Wheat	plastid	77.16	80.07
HORVU5Hr1G027720.1	Barley	plastid	76.82	77.62
GSMUA_Achr4P03580_001	Banana	plastid	67.99	76.91
PGSC0003DMT400018994	Potato	plastid	71.28	74.37
Solyc11g065830.1.1	Tomato	plastid	71.11	74.05
CDY53969	Canola	plastid	70.59	73.91
KRH24714	Soybean	plastid	70.24	73.42
AT5G12860.1	Thale cress	plastid	70.24	72.89
KRH29718	Soybean	plastid	70.42	72.68
VIT_06s0004g02120.t01	Wine grape	plastid	70.07	72.45
CDX97208	Canola	plastid	70.42	71.53
GSMUA_Achr7P27130_001	Banana	plastid	64.53	68.57
Zm00001d005950_P001	Maize	plastid	38.41	40.07
Zm00001d031253_P001	Maize	plastid	37.72	39.56
Zm00001d033124_P001	Maize	mitochondrion, plastid	4.84	28.0
Zm00001d020803_P001	Maize	peroxisome	7.79	27.11

Protein Annotations

MapMan:24.2.7.1.2	EntrezGene:542560	EMBL:AB112936	ProteinID:AQK40407.1	InterPro:CitT-rel	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006814	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	PFAM:PF00939	PANTHER:PTHR42826	PANTHER:PTHR42826:SF3	UniProt:Q768R5
InterPro:SLC13A/DASS	TIGRFAMs:TIGR00785	TMHMM:TMhelix	UniParc:UPI000022DE22	EnsemblPlantsGene:Zm00001d023929	EnsemblPlants:Zm00001d023929_P001
EnsemblPlants:Zm00001d023929_T001	SEG:seg	:	:	:	:

Description

oxo-glutarate/malate transporter1 oxo-glutarate/malate transporter1

Coordinates

chr10:-:29148234..29154174

Molecular Weight (calculated)

59892.0 Da

IEP (calculated)

10.210

GRAVY (calculated)

0.765

Length

578 amino acids

Sequence
(BLAST)

001: MASSTAASPL TCHHLGSVGA RPRLPSLSIS LRRRSSSSSK PTSLSHSLPS KHSLAPPPAA SASSRRGLTP VPASASAAAA PAPDPVPVPA PAPAPAPAPA
101: APPKKPALQG AAIKPLLASI ATGVLIWLIP PPAGVPRNAW QLLAIFLSTI VGIITQPLPL GAVALLGLGA AVLSRTLTFA AAFSAFGDPI PWLIALAFFF
201: ARGFIKTGLG SRVAYAFVAA FGSSSLGLGY SLVFAEALLA PAIPSVSARA GGIFLPLVKS LCEACGSRAG DGTERRLGAW LMLTCFQTSV VSSAMFLTAM
301: AANPLSANLT AATIGEGIGW TLWAKAAIVP GLLSLVLVPL ILYVIYPPEV KASPDAPRLA KERLAKMGPM SKEETIMAGT LLLTVGLWIF GGMLNVDAVS
401: AAILGLAVLL ISGVVTWKEC LAESVAWDTL TWFAALIAMA GYLNKFGLIS WFSETVVKFV GGLGMSWQLS FGVLVLLYFY SHYFFASGAA HIGAMFTAFL
501: SVASALGTPS LFAAMVLSFL SNLMGGTTHY GIGSAPVFYG AGYVPLAQWW GYGFVISVVN IIIWLGVGGF WWKIIGLW

Best Arabidopsis Sequence Match ( AT5G12860.1 )
(BLAST)

001: MASLALSGSC SLAFPLKSRS LSLPRPPSSS LNLTKPLRSL DSRFSLLKSP LPVSLRRRSS TLVKASSTVA SASSSPTPPL VPAPVPWQGA AIKPLLASIA
101: TGLILWFVPV PEGVTRNAWQ LLAIFLATIV GIITQPLPLG AVALMGLGAS VLTKTLTFAA AFSAFGDPIP WLIALAFFFA RGFIKTGLGN RVAYQFVRLF
201: GSSSLGLGYS LVFSEALLAP AIPSVSARAG GIFLPLVKSL CVACGSNVGD GTEHRLGSWL MLTCFQTSVI SSSMFLTAMA ANPLSANLAF NTIKQTIGWT
301: DWAKAAIVPG LVSLIVVPFL LYLIYPPTVK SSPDAPKLAQ EKLDKMGPMS KNELIMAATL FLTVGLWIFG AKLGVDAVTA AILGLSVLLV TGVVTWKECL
401: AESVAWDTLT WFAALIAMAG YLNKYGLIEW FSQTVVKFVG GLGLSWQLSF GILVLLYFYT HYFFASGAAH IGAMFTAFLS VSTALGTPPY FAALVLAFLS
501: NLMGGLTHYG IGSAPIFYGA NYVPLAKWWG YGFLISIVNI LIWLGVGGAW WKFIGLW

Arabidopsis Description

DIT1Dicarboxylate transporter 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LXV3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.