Factsheet for TraesCS5D01G113100.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008876.1-P	Field mustard	extracellular, plasma membrane, vacuole	82.49	82.49
TraesCS5A01G100600.1	Wheat	golgi, plastid	99.66	53.33
TraesCS5B01G105700.1	Wheat	plastid	100.0	53.32
HORVU5Hr1G027720.1	Barley	plastid	98.99	51.4
GSMUA_Achr4P03580_001	Banana	plastid	86.87	50.49
Os12t0515400-01	Rice	plastid	92.59	50.18
EES16067	Sorghum	plastid	93.27	47.43
Zm00001d023929_P001	Maize	plastid	91.58	47.06
PGSC0003DMT400018994	Potato	plastid	85.86	46.03
Solyc11g065830.1.1	Tomato	plastid	85.86	45.95
KRH24714	Soybean	plastid	83.84	45.03
KRH29718	Soybean	plastid	84.51	44.82
CDY53969	Canola	plastid	82.49	44.38
VIT_06s0004g02120.t01	Wine grape	plastid	83.5	44.36
AT5G12860.1	Thale cress	plastid	82.83	44.17
CDX97208	Canola	plastid	82.49	43.06
GSMUA_Achr7P27130_001	Banana	plastid	78.45	42.83
TraesCS5D01G256100.1	Wheat	mitochondrion, plastid	41.41	22.36
TraesCS7D01G283000.1	Wheat	unclear	41.08	21.94

Protein Annotations

EnsemblPlants:TraesCS5D01G113100.1	EnsemblPlantsGene:TraesCS5D01G113100	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006814	GO:GO:0008150	GO:GO:0016020	GO:GO:0055085	InterPro:CitT-rel	InterPro:SLC13A/DASS
PANTHER:PTHR42826	PANTHER:PTHR42826:SF3	PFAM:PF00939	SEG:seg	TIGRFAMs:TIGR00785	TMHMM:TMhelix
MapMan:24.2.7.1.2	:	:	:	:	:

Description

No Description!

Coordinates

chr5D:-:129864350..129866655

Molecular Weight (calculated)

31859.7 Da

IEP (calculated)

7.491

GRAVY (calculated)

0.950

Length

297 amino acids

Sequence
(BLAST)

001: MLTCFQTSVI SSAMFLTAMA ANPLAANLTL STIGQGIGWT LWAKAAIVPG LLSLLIVPLV LYVIYPPEVK TSPDAPRLAK ERLAKMGPMS TEEKIMAGTL
101: LLTVGLWIFG GMLSVDAVSA AILGLSVLLI TGVVTWKECL AESVAWDTLT WFAALIAMAG YLNKYGLISW FSETVVKFVG GLGLSWQLSF GVLVLMYFYS
201: HYFFASGAAH IGAMFTAFLS VASALGTPPL FAAMVMSFLS NLMGGLTHYG IGSAPVFYGA GYVPLAEWWG YGFVISVVNI IIWLGAGGFW WKMIGLW

Best Arabidopsis Sequence Match ( AT5G12860.1 )
(BLAST)

001: MASLALSGSC SLAFPLKSRS LSLPRPPSSS LNLTKPLRSL DSRFSLLKSP LPVSLRRRSS TLVKASSTVA SASSSPTPPL VPAPVPWQGA AIKPLLASIA
101: TGLILWFVPV PEGVTRNAWQ LLAIFLATIV GIITQPLPLG AVALMGLGAS VLTKTLTFAA AFSAFGDPIP WLIALAFFFA RGFIKTGLGN RVAYQFVRLF
201: GSSSLGLGYS LVFSEALLAP AIPSVSARAG GIFLPLVKSL CVACGSNVGD GTEHRLGSWL MLTCFQTSVI SSSMFLTAMA ANPLSANLAF NTIKQTIGWT
301: DWAKAAIVPG LVSLIVVPFL LYLIYPPTVK SSPDAPKLAQ EKLDKMGPMS KNELIMAATL FLTVGLWIFG AKLGVDAVTA AILGLSVLLV TGVVTWKECL
401: AESVAWDTLT WFAALIAMAG YLNKYGLIEW FSQTVVKFVG GLGLSWQLSF GILVLLYFYT HYFFASGAAH IGAMFTAFLS VSTALGTPPY FAALVLAFLS
501: NLMGGLTHYG IGSAPIFYGA NYVPLAKWWG YGFLISIVNI LIWLGVGGAW WKFIGLW

Arabidopsis Description

DIT1Dicarboxylate transporter 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LXV3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.