Factsheet for TraesCS5D01G256100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 4
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G248900.1	Wheat	golgi, unclear	97.64	98.35
TraesCS5B01G246600.1	Wheat	plastid	96.73	96.73
Os09t0470000-01	Rice	endoplasmic reticulum, mitochondrion, plasma membrane	17.27	94.06
HORVU5Hr1G070230.1	Barley	plastid	94.73	91.08
GSMUA_Achr5P17890_001	Banana	mitochondrion, plasma membrane, plastid	51.09	83.38
GSMUA_Achr10P...	Banana	mitochondrion, plasma membrane, plastid	50.55	82.49
Zm00001d005950_P001	Maize	plastid	82.18	81.59
EER96900	Sorghum	plastid	82.36	81.33
TraesCS7D01G283000.1	Wheat	unclear	78.18	77.34
EES04490	Sorghum	plastid	76.73	74.96
KRH18862	Soybean	golgi, plasma membrane, vacuole	31.64	71.02
GSMUA_Achr10P...	Banana	mitochondrion	71.09	70.32
Bra024282.1-P	Field mustard	plastid	70.73	70.09
CDX81219	Canola	plastid	70.73	69.96
CDY43805	Canola	plastid	70.55	69.91
PGSC0003DMT400032652	Potato	plastid	74.18	69.86
CDX84512	Canola	plastid	71.09	69.57
AT5G64290.1	Thale cress	plastid	70.91	69.27
Os09t0469950-00	Rice	plasma membrane	35.45	69.15
Solyc01g105540.2.1	Tomato	plastid	71.64	69.12
Bra037771.1-P	Field mustard	plastid	70.36	68.74
CDY18717	Canola	plastid	70.36	68.74
VIT_03s0017g00640.t01	Wine grape	plastid	70.18	68.44
KRH43882	Soybean	endoplasmic reticulum, plastid	68.18	67.33
KRH10575	Soybean	plastid	68.36	66.9
AT5G64280.1	Thale cress	plastid	63.45	63.57
CDY31328	Canola	plastid	64.18	63.38
Bra031926.1-P	Field mustard	plastid	63.82	63.13
CDY46791	Canola	plasma membrane	63.64	53.27
PGSC0003DMT400017518	Potato	plastid	26.18	53.14
TraesCS5D01G113100.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	22.36	41.41

Protein Annotations

EnsemblPlants:TraesCS5D01G256100.1	EnsemblPlantsGene:TraesCS5D01G256100	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006814	GO:GO:0008150	GO:GO:0016020	GO:GO:0055085	InterPro:CitT-rel	InterPro:SLC13A/DASS
PANTHER:PTHR42826	PANTHER:PTHR42826:SF4	PFAM:PF00939	SEG:seg	TIGRFAMs:TIGR00785	TMHMM:TMhelix
MapMan:24.2.7.1.2	:	:	:	:	:

Description

No Description!

Coordinates

chr5D:+:362398503..362402738

Molecular Weight (calculated)

58789.2 Da

IEP (calculated)

9.383

GRAVY (calculated)

0.605

Length

550 amino acids

Sequence
(BLAST)

001: MERLRVAVSH RPPLLVGAPN HLRRRQLHLP LPLASRPLSS RHRLLSPAPR RHARHLLASQ TPGPESGPDP DAEASAEPAG AKLVPLVVSL AAGLAVRFLA
101: PRPAEVTLQA WQLLSIFLST IAGLVLGPLP VGAWAFLGLT TAVATRTLPF ETAFSAFTNE VIWLIVISFF FARGFVKTGL GDRIATYFIK WLGGSTLGLS
201: YGLTVSEACI APAMPSTTAR AGGVFLPIIK SLSLSAGSKP NDPSSRKLGS YLVMTQFQAG SNSSALFLTA AAQNLLCLKL AEELGIIVAN PWVSWFQAAS
301: LPAIVSLLAT PYLLYKIFPP EIKDTPEAPA LAAEKLKRMG PVTKNEWVMI GTMILAVSLW VFGDAIGVSS VVAAMLGLSI LLLLGVLDWD DCLSEKSAWD
401: TLSWFAVLVA MAGQLTDLGI VSWMSTSVAK LLESFSLSWP AAFVVLEASY FLVHYLFASQ TGHVGALYSA FLAMHVAAGV PGVLSALALA FNTNLFGALT
501: HYSSGQAAVY FGAGYLELPD IFRLGFVTAL INALIWGVVG TFWWKFLGLY

Best Arabidopsis Sequence Match ( AT5G64290.1 )
(BLAST)

001: MESFALHSLS TTATSTLLSH HHHHHPSRLS LLRRTSSRSP PSTISLRSLS VQPLSFPLLK PIPRFSTRIA AAPQDNAPPP PPPSPSPSPS PQGAKLIPLI
101: LSISVGLILR FAVPVPEGVT PQGWQLLSIF LSTIAGLVLS PLPVGAWAFI GLTASIVTKT LSFSAAFSAF TSEVIWLIVI SFFFARGFVK TGLGDRIATY
201: FVKWLGKSTL GLSYGLTLSE ALIAPAMPST TARAGGIFLP IIKSLSLSAG SKPNDSSSRK LGSYLIQSQF QCAGNSSALF LTAAAQNLLC LKLAEELGVV
301: ISNPWVSWFK AASLPAIISL LCTPLILYKL YPPETKDTPE APGIAATKLK QMGPVTKNEW IMVGTMLLAV TLWICGETLG IPSVVAAMIG LSILLVLGVL
401: NWDDCLSEKS AWDTLAWFAV LVGMAGQLTN LGVVTWMSDC VAKVLQSLSL SWPAAFGLLQ AAYFFIHYLF ASQTGHVGAL FSAFLAMHIA AGVPGILAAL
501: ALAYNTNLFG ALTHYSSGQA AVYYGAGYVD LPDVFKIGFV MATINAIIWG VVGTFWWKFL GLY

Arabidopsis Description

DIT2-1Dicarboxylate transporter 2.1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FMF7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.