CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18717	Canola	plastid	93.17	92.01
Bra037771.1-P	Field mustard	plastid	92.99	91.83
CDY43805	Canola	plastid	90.65	90.81
CDX84512	Canola	plastid	90.29	89.32
AT5G64290.1	Thale cress	plastid	89.39	88.28
Os09t0470000-01	Rice	endoplasmic reticulum, mitochondrion, plasma membrane	15.11	83.17
GSMUA_Achr5P17890_001	Banana	mitochondrion, plasma membrane, plastid	50.18	82.79
GSMUA_Achr10P...	Banana	mitochondrion, plasma membrane, plastid	50.18	82.79
Os08t0481800-01	Rice	plastid	35.07	81.59
KRH18862	Soybean	golgi, plasma membrane, vacuole	32.91	74.69
Solyc01g105540.2.1	Tomato	plastid	75.18	73.33
PGSC0003DMT400032652	Potato	plastid	76.98	73.29
KRH43882	Soybean	endoplasmic reticulum, plastid	73.02	72.89
KRH10575	Soybean	plastid	73.38	72.6
TraesCS5A01G248900.1	Wheat	golgi, unclear	70.5	71.79
VIT_03s0017g00640.t01	Wine grape	plastid	72.66	71.63
TraesCS7D01G283000.1	Wheat	unclear	71.58	71.58
TraesCS7A01G285000.1	Wheat	golgi	71.58	71.58
TraesCS7B01G199700.1	Wheat	plasma membrane, plastid	71.22	71.22
TraesCS5B01G246600.1	Wheat	plastid	70.32	71.09
TraesCS5D01G256100.1	Wheat	mitochondrion, plastid	69.96	70.73
HORVU7Hr1G063220.1	Barley	plastid	70.68	70.68
Zm00001d031253_P001	Maize	plastid	69.42	70.05
EES15485	Sorghum	plastid	69.24	69.87
Zm00001d005950_P001	Maize	plastid	69.6	69.86
EER96900	Sorghum	plastid	69.6	69.48
CDY31328	Canola	plastid	68.53	68.4
GSMUA_Achr10P...	Banana	mitochondrion	68.35	68.35
EES14336	Sorghum	golgi, plastid, vacuole	64.75	68.18
HORVU5Hr1G070230.1	Barley	plastid	69.6	67.66
EES04490	Sorghum	plastid	68.35	67.5
Os09t0469950-00	Rice	plasma membrane	29.5	58.16
CDY46791	Canola	plasma membrane	65.47	55.4
PGSC0003DMT400017518	Potato	plastid	26.44	54.24
Zm00001d020803_P001	Maize	peroxisome	13.67	45.78
CDY53969	Canola	plastid	40.11	40.4
CDX97208	Canola	plastid	40.11	39.19

Protein Annotations

EnsemblPlants:CDX81219	EnsemblPlantsGene:GSBRNA2T00134685001	GO:A0A078CYZ1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0006814	GO:GO:0008150	GO:GO:0016020	GO:GO:0055085	InterPro:CitT-rel
InterPro:SLC13A/DASS	PANTHER:PTHR42826	PANTHER:PTHR42826:SF1	PFAM:PF00939	ProteinID:CDX81219	ProteinID:CDX81219.1
SEG:seg	TIGRFAMs:TIGR00785	TMHMM:TMhelix	UniParc:UPI0004EB438C	MapMan:24.2.7.1.2	:

Description

BnaC09g06300D

Coordinates

chrLK031824:-:164891..167730

Molecular Weight (calculated)

59235.0 Da

IEP (calculated)

9.487

GRAVY (calculated)

0.633

Length

556 amino acids

Sequence
(BLAST)

001: MESYALHSPS TPASFSHHPS RLSLLRRISS RSPPSTISLP SLRSHSVQPL TFPLLKPIPR LSARIAAAPR DDIPPPSPSP SQPQQGAKLL PLILSLSVGL
101: ILRFAVSLPE GLTPQGWQLL SIFLSTIAGL VLSPLPVGAW AFMGLTASIV TKTLSFSAAF SAFTSEVIWL IVISFFFARG FVKTGLGDRI ATYFVKWLGK
201: STLGLSYGLT ISEALIAPAM PSTTARAGGI FLPIIKSLSL SAGSKPGDSS SRKLGSYLIQ SQFQCAGNSS ALFLTAAAQN LLCLKLAEEL GVVIANPWVS
301: WFKAASLPAI ISLLCTPLIL YKLYPPETKD TPEAPGIAAL KLKEMGPVTK NEWIMVGTML LAVTLWICGE SLGIPSVVAA MIGLSILLLL GVLNWDDCLS
401: EKSAWDTLAW FAVLVGMAGQ LTNLGVVTWM SDCVAKVLQS LSLSWPAAFG LLQAAYFFIH YLFASQTGHV GALFSAFLAM NIAAGVPGVL AALALAYNTN
501: LFGALTHYSS GQAAVYYGAG YVDLPDVFKI GFVMATINAI IWGVVGTFWW KFLGLY

Best Arabidopsis Sequence Match ( AT5G64290.1 )
(BLAST)

001: MESFALHSLS TTATSTLLSH HHHHHPSRLS LLRRTSSRSP PSTISLRSLS VQPLSFPLLK PIPRFSTRIA AAPQDNAPPP PPPSPSPSPS PQGAKLIPLI
101: LSISVGLILR FAVPVPEGVT PQGWQLLSIF LSTIAGLVLS PLPVGAWAFI GLTASIVTKT LSFSAAFSAF TSEVIWLIVI SFFFARGFVK TGLGDRIATY
201: FVKWLGKSTL GLSYGLTLSE ALIAPAMPST TARAGGIFLP IIKSLSLSAG SKPNDSSSRK LGSYLIQSQF QCAGNSSALF LTAAAQNLLC LKLAEELGVV
301: ISNPWVSWFK AASLPAIISL LCTPLILYKL YPPETKDTPE APGIAATKLK QMGPVTKNEW IMVGTMLLAV TLWICGETLG IPSVVAAMIG LSILLVLGVL
401: NWDDCLSEKS AWDTLAWFAV LVGMAGQLTN LGVVTWMSDC VAKVLQSLSL SWPAAFGLLQ AAYFFIHYLF ASQTGHVGAL FSAFLAMHIA AGVPGILAAL
501: ALAYNTNLFG ALTHYSSGQA AVYYGAGYVD LPDVFKIGFV MATINAIIWG VVGTFWWKFL GLY

Arabidopsis Description

DIT2-1Dicarboxylate transporter 2.1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FMF7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.