CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031926.1-P	Field mustard	plastid	88.15	88.31
AT5G64280.1	Thale cress	plastid	81.15	82.33
CDY46791	Canola	plasma membrane	86.71	73.52
GSMUA_Achr10P...	Banana	mitochondrion, plasma membrane, plastid	42.91	70.92
GSMUA_Achr5P17890_001	Banana	mitochondrion, plasma membrane, plastid	42.73	70.62
Os09t0470000-01	Rice	endoplasmic reticulum, mitochondrion, plasma membrane	12.57	69.31
CDX81219	Canola	plastid	68.4	68.53
CDX84512	Canola	plastid	68.76	68.15
CDY43805	Canola	plastid	67.86	68.11
Os08t0481800-01	Rice	plastid	29.08	67.78
CDY18717	Canola	plastid	68.4	67.67
TraesCS5A01G248900.1	Wheat	golgi, unclear	63.38	64.65
VIT_03s0017g00640.t01	Wine grape	plastid	65.35	64.54
TraesCS5D01G256100.1	Wheat	mitochondrion, plastid	63.38	64.18
TraesCS5B01G246600.1	Wheat	plastid	62.84	63.64
KRH43882	Soybean	endoplasmic reticulum, plastid	63.38	63.38
Zm00001d005950_P001	Maize	plastid	62.66	63.0
KRH10575	Soybean	plastid	63.55	62.99
Zm00001d031253_P001	Maize	plastid	62.3	62.98
EES15485	Sorghum	plastid	62.3	62.98
PGSC0003DMT400032652	Potato	plastid	65.89	62.84
KRH18862	Soybean	golgi, plasma membrane, vacuole	27.47	62.45
Solyc01g105540.2.1	Tomato	plastid	63.73	62.28
EER96900	Sorghum	plastid	62.12	62.12
TraesCS7A01G285000.1	Wheat	golgi	61.58	61.69
TraesCS7D01G283000.1	Wheat	unclear	61.58	61.69
TraesCS7B01G199700.1	Wheat	plasma membrane, plastid	61.4	61.51
HORVU7Hr1G063220.1	Barley	plastid	61.4	61.51
EES14336	Sorghum	golgi, plastid, vacuole	58.17	61.36
GSMUA_Achr10P...	Banana	mitochondrion	60.68	60.79
HORVU5Hr1G070230.1	Barley	plastid	62.3	60.66
EES04490	Sorghum	plastid	59.96	59.33
Os09t0469950-00	Rice	plasma membrane	26.93	53.19
PGSC0003DMT400017518	Potato	plastid	24.42	50.18
CDY53969	Canola	plastid	38.42	38.77
CDX97208	Canola	plastid	38.6	37.79
Zm00001d020803_P001	Maize	peroxisome	10.95	36.75

Protein Annotations

MapMan:24.2.7.1.2	GO:A0A078H3B2	UniProt:A0A078H3B2	EnsemblPlants:CDY31328	ProteinID:CDY31328	ProteinID:CDY31328.1
InterPro:CitT-rel	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006814
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00047506001	PFAM:PF00939
PANTHER:PTHR42826	PANTHER:PTHR42826:SF1	InterPro:SLC13A/DASS	TIGRFAMs:TIGR00785	TMHMM:TMhelix	UniParc:UPI0004EE0D07
SEG:seg	:	:	:	:	:

Description

BnaA02g34130DBnaA02g34130D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H3B2]

Coordinates

chrLK032270:+:226724..229182

Molecular Weight (calculated)

59245.8 Da

IEP (calculated)

9.897

GRAVY (calculated)

0.634

Length

557 amino acids

Sequence
(BLAST)

001: MESLALRSLS TTASSPLSYL SLRRSYSRSL TIPHPSISLH SSSSTVLSLS LSSPRLTLRA AAPSASSSPE IQNNPQSSSS SSSPPQGAKL IPLAISISIG
101: LIVRFLIPKP EQVTSQGWQL LSVFLFTISG LVLGPLPVGA WAFIGLTASI VTRTLSFSTA FAAFTNELIW LIAISFFFAR GFVKTGLGDR IATYFVKWLG
201: RSTLGLSYGL VLCETFMGLI MPSTMARAGG VFLPVIKSLS LSAGSKPGDS SSRRLGAFLI QTQLQCAGTS GALLLTSAAQ NLLCLKLARE VGVVLSNPWV
301: SWFKAASVPA FASLLCTPLI IYKLYPPELK HTPEAPAAAA KKLERLGPIT KNEWIMLGAM AFTVSLWVFG EAIGVSSVVS AMIGLSTLLV LGVINWNDCL
401: SDKSAWDSLT WFAVLIGMAG QLTNLGVVAW MSDCVAKLLQ TLSLTWPASF VILQASYLLL HYVFASQTAH AGALYPAFLA MQIAAGVPGV LAALCLAFNN
501: NLSGALAHYS SGPAALYYGA GYVDLKDMFR LGFVMALLQA VIWGSVGSLW WKFLGLY

Best Arabidopsis Sequence Match ( AT5G64280.1 )
(BLAST)

001: MESLALRSIS LSASYLSLHR SSSKSFALLP PSISVHTSPT LRSLSISSPR FTLRATASSL PEEQNKPQPP PPSPPQPQGA KLIPLAISVS IGLIVRFLIP
101: RPEQVTSQGW QLLSIFLFTI SGLVLGPLPV GAWAFIGLTA SIVTKTLPFS TAFAAFTNEL IWLIAISFFF ARGFIKTGLG DRIATYFVKW LGKSTLGLSY
201: GLAFCETLMG LIMPSTMARA GGVFLPVIKS LAISAGSYPG DPSSRKLGSF LIQTQLQCSG ASGAILLTSA AQNLLCLKLA REVGVVISNP WITWFKVASV
301: PAFVSLLCTP LIIYKLYPPE LKHTPEAPAA AAKKLERLGP ITKNEWIMLG AMAFTVSLWV FGEAIGIASV VSAMIGLSTL LLLGVINWDD CLSDKSAWDS
401: LTWFAVLIGM AGQLTNLGVV AWMSDCVAKL LQSLSLTWPA SFIILQACYL LIHYLFASQT GHAGALYPPF LAMQIAAGVP GVLAALCLAF NNNLSGALAH
501: YSGGPAALYY GAGYVDLRDM FRVGFVMALV QAIIWGGVGS FWWKFLGLY

Arabidopsis Description

DIT2-2Dicarboxylate transporter 2.2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FMF8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.