Factsheet for Zm00001d020803_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	mitochondrion, peroxisome, plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033124_P001	Maize	mitochondrion, plastid	19.28	32.0
GSMUA_Achr5P17890_001	Banana	mitochondrion, plasma membrane, plastid	39.76	19.58
GSMUA_Achr10P...	Banana	mitochondrion, plasma membrane, plastid	39.16	19.29
KRH18862	Soybean	golgi, plasma membrane, vacuole	25.3	17.14
Zm00001d005950_P001	Maize	plastid	48.8	14.62
Bra024282.1-P	Field mustard	plastid	45.78	13.69
CDY43805	Canola	plastid	45.78	13.69
CDX81219	Canola	plastid	45.78	13.67
CDX84512	Canola	plastid	45.78	13.52
Bra037771.1-P	Field mustard	plastid	45.18	13.32
CDY18717	Canola	plastid	45.18	13.32
HORVU7Hr1G063220.1	Barley	plastid	44.58	13.31
TraesCS7D01G283000.1	Wheat	unclear	44.58	13.31
TraesCS7B01G199700.1	Wheat	plasma membrane, plastid	44.58	13.31
TraesCS7A01G285000.1	Wheat	golgi	44.58	13.31
Solyc01g105540.2.1	Tomato	plastid	43.98	12.81
AT5G64290.1	Thale cress	plastid	43.37	12.79
Zm00001d031253_P001	Maize	plastid	41.57	12.52
PGSC0003DMT400032652	Potato	plastid	43.98	12.5
KRH10575	Soybean	plastid	41.57	12.28
GSMUA_Achr10P...	Banana	mitochondrion	40.96	12.23
KRH43882	Soybean	endoplasmic reticulum, plastid	40.96	12.21
VIT_03s0017g00640.t01	Wine grape	plastid	38.55	11.35
Bra031926.1-P	Field mustard	plastid	36.75	10.97
CDY31328	Canola	plastid	36.75	10.95
AT5G64280.1	Thale cress	plastid	35.54	10.75
CDY46791	Canola	plasma membrane	38.55	9.74
Zm00001d023929_P001	Maize	plastid	27.11	7.79
PGSC0003DMT400017518	Potato	plastid	6.02	3.69

Protein Annotations

EnsemblPlants:Zm00001d020803_P001	EnsemblPlants:Zm00001d020803_T001	EnsemblPlantsGene:Zm00001d020803	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0006814	GO:GO:0008150	GO:GO:0016020	GO:GO:0055085	InterPro:CitT-rel
InterPro:SLC13A/DASS	PANTHER:PTHR42826	PANTHER:PTHR42826:SF1	PFAM:PF00939	ProteinID:ONM55629.1	SEG:seg
UniParc:UPI0008443DD0	UniProt:A0A1D6I6B4	MapMan:35.1	:	:	:

Description

Dicarboxylate transporter 2.1 chloroplastic

Coordinates

chr7:+:133370055..133376861

Molecular Weight (calculated)

17261.1 Da

IEP (calculated)

10.432

GRAVY (calculated)

-0.057

Length

166 amino acids

Sequence
(BLAST)

001: MEQVTRGSRC DKGKGGPVAG DDGGGCAAKG GVGGGSALQR GRGAVVVRME AGTRARGTAY CGFKGKLPGI FLGKATGNSS ALFLTAAAQN LSCLKLAEEF
101: GVIIANPWVS WLKAASLPAF VSLIATPYLL KLFPPETKDA PDALELAEEN LKRMGPVRLR QKTNRL

Best Arabidopsis Sequence Match ( AT5G64290.1 )
(BLAST)

001: MESFALHSLS TTATSTLLSH HHHHHPSRLS LLRRTSSRSP PSTISLRSLS VQPLSFPLLK PIPRFSTRIA AAPQDNAPPP PPPSPSPSPS PQGAKLIPLI
101: LSISVGLILR FAVPVPEGVT PQGWQLLSIF LSTIAGLVLS PLPVGAWAFI GLTASIVTKT LSFSAAFSAF TSEVIWLIVI SFFFARGFVK TGLGDRIATY
201: FVKWLGKSTL GLSYGLTLSE ALIAPAMPST TARAGGIFLP IIKSLSLSAG SKPNDSSSRK LGSYLIQSQF QCAGNSSALF LTAAAQNLLC LKLAEELGVV
301: ISNPWVSWFK AASLPAIISL LCTPLILYKL YPPETKDTPE APGIAATKLK QMGPVTKNEW IMVGTMLLAV TLWICGETLG IPSVVAAMIG LSILLVLGVL
401: NWDDCLSEKS AWDTLAWFAV LVGMAGQLTN LGVVTWMSDC VAKVLQSLSL SWPAAFGLLQ AAYFFIHYLF ASQTGHVGAL FSAFLAMHIA AGVPGILAAL
501: ALAYNTNLFG ALTHYSSGQA AVYYGAGYVD LPDVFKIGFV MATINAIIWG VVGTFWWKFL GLY

Arabidopsis Description

DIT2-1Dicarboxylate transporter 2.1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FMF7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.