CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 1
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	extracellular, plasma membrane, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	extracellular
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31328	Canola	plastid	73.52	86.71
AT5G64280.1	Thale cress	plastid	67.28	80.51
GSMUA_Achr10P...	Banana	mitochondrion, plasma membrane, plastid	36.38	70.92
GSMUA_Achr5P17890_001	Banana	mitochondrion, plasma membrane, plastid	36.23	70.62
Os09t0470000-01	Rice	endoplasmic reticulum, mitochondrion, plasma membrane	10.65	69.31
Os08t0481800-01	Rice	plastid	25.11	69.04
CDY43805	Canola	plastid	55.56	65.77
CDX84512	Canola	plastid	56.16	65.66
CDX81219	Canola	plastid	55.4	65.47
CDY18717	Canola	plastid	56.01	65.36
TraesCS5A01G248900.1	Wheat	golgi, unclear	53.42	64.29
TraesCS5D01G256100.1	Wheat	mitochondrion, plastid	53.27	63.64
TraesCS5B01G246600.1	Wheat	plastid	53.12	63.45
PGSC0003DMT400032652	Potato	plastid	55.86	62.84
EER96900	Sorghum	plastid	53.12	62.66
KRH43882	Soybean	endoplasmic reticulum, plastid	53.12	62.66
Solyc01g105540.2.1	Tomato	plastid	54.19	62.46
KRH10575	Soybean	plastid	53.42	62.46
Zm00001d005950_P001	Maize	plastid	52.66	62.45
KRH18862	Soybean	golgi, plasma membrane, vacuole	23.29	62.45
VIT_03s0017g00640.t01	Wine grape	plastid	53.58	62.41
EES15485	Sorghum	plastid	51.9	61.89
HORVU7Hr1G063220.1	Barley	plastid	51.9	61.33
TraesCS7A01G285000.1	Wheat	golgi	51.9	61.33
TraesCS7B01G199700.1	Wheat	plasma membrane, plastid	51.9	61.33
TraesCS7D01G283000.1	Wheat	unclear	51.9	61.33
Zm00001d031253_P001	Maize	plastid	51.29	61.16
EES14336	Sorghum	golgi, plastid, vacuole	48.55	60.42
HORVU5Hr1G070230.1	Barley	plastid	52.36	60.14
GSMUA_Achr10P...	Banana	mitochondrion	50.38	59.53
EES04490	Sorghum	plastid	50.38	58.79
Os09t0469950-00	Rice	plasma membrane	22.53	52.48
PGSC0003DMT400017518	Potato	plastid	20.7	50.18
Zm00001d020803_P001	Maize	peroxisome	9.74	38.55
CDY53969	Canola	plastid	32.27	38.41
CDX97208	Canola	plastid	32.72	37.79

Protein Annotations

MapMan:24.2.7.1.2	GO:A0A078IA88	UniProt:A0A078IA88	EnsemblPlants:CDY46791	ProteinID:CDY46791	ProteinID:CDY46791.1
InterPro:CitT-rel	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006814
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00086220001	PFAM:PF00939
PANTHER:PTHR42826	PANTHER:PTHR42826:SF1	InterPro:SLC13A/DASS	TIGRFAMs:TIGR00785	TMHMM:TMhelix	UniParc:UPI0004EE6335
SEG:seg	:	:	:	:	:

Description

BnaC02g42990DBnaC02g42990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IA88]

Coordinates

chrLK032686:-:9..4318

Molecular Weight (calculated)

70694.4 Da

IEP (calculated)

9.695

GRAVY (calculated)

0.519

Length

657 amino acids

Sequence
(BLAST)

001: MSDCVAKALQ SLNLSWPDAF GFLQAAYFLT HYPFASQTGH VRALFSAYLS YNKIRCFISF TCCSFQHQSF CCFDAYSSGQ VPNKLNLPRR ELRINSTTME
101: SFALRSLSTT ATSSLSYLSL RRSSSRSLSL SLTHPPISLY TSSPTVRSLS TSSPRLTLRA TASSASSSPE IQNNPQSSSS SSSPPQGAKL IPVAISISIG
201: LIVRFLIPKP EQVTPQGWQL LSVFLFTISG LVLGPLPVGA WAFIGLTASI VTRTLPFSTA FAAFTNELIW LIAISFFFAR GFVKTGLGDR IATYFVKWLG
301: RSTLGLSYGL VLCETFMGLI MPSTMARAGG VFLPVIKSLS LSAGSRPGDS SSRKLGAFLI QTQLQCAGTS GALLLTSAAQ NLLCLKLARE VGVVLSNPWV
401: SWFKAASVPA FASLLCTPLL IYKLYPPELK HTPEAPAAAA KKLERLGPIT KNEWIMLGAM AFTVSLWVFG EAIGVSSVVS AMIGLSMLLL LGVINWNDCL
501: SDKSAWDSLT WFAVLIGMAG QLTNLGVVSW MSDCVAKLLQ TLSLTWPASF VILQASYLLL HYVFASQTAH AGALYPAFLA MQIAAGVPGV LAALCLAFNN
601: NLSGALAHYS SGPAALYYGA GYVDLKDMFR LGFVMALLQA VIWGSVGSVW WKFLGLY

Best Arabidopsis Sequence Match ( AT5G64280.1 )
(BLAST)

001: MESLALRSIS LSASYLSLHR SSSKSFALLP PSISVHTSPT LRSLSISSPR FTLRATASSL PEEQNKPQPP PPSPPQPQGA KLIPLAISVS IGLIVRFLIP
101: RPEQVTSQGW QLLSIFLFTI SGLVLGPLPV GAWAFIGLTA SIVTKTLPFS TAFAAFTNEL IWLIAISFFF ARGFIKTGLG DRIATYFVKW LGKSTLGLSY
201: GLAFCETLMG LIMPSTMARA GGVFLPVIKS LAISAGSYPG DPSSRKLGSF LIQTQLQCSG ASGAILLTSA AQNLLCLKLA REVGVVISNP WITWFKVASV
301: PAFVSLLCTP LIIYKLYPPE LKHTPEAPAA AAKKLERLGP ITKNEWIMLG AMAFTVSLWV FGEAIGIASV VSAMIGLSTL LLLGVINWDD CLSDKSAWDS
401: LTWFAVLIGM AGQLTNLGVV AWMSDCVAKL LQSLSLTWPA SFIILQACYL LIHYLFASQT GHAGALYPPF LAMQIAAGVP GVLAALCLAF NNNLSGALAH
501: YSGGPAALYY GAGYVDLRDM FRVGFVMALV QAIIWGGVGS FWWKFLGLY

Arabidopsis Description

DIT2-2Dicarboxylate transporter 2.2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FMF8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.