Factsheet for GSMUA_Achr5P17890_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, plastid

Predictor Summary:

plastid 3
mitochondrion 2
vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plasma membrane, plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	mitochondrion, plasma membrane, plastid	92.88	92.88
Os09t0470000-01	Rice	endoplasmic reticulum, mitochondrion, plasma membrane	25.22	84.16
Os08t0481800-01	Rice	plastid	57.86	81.59
KRH18862	Soybean	golgi, plasma membrane, vacuole	51.04	70.2
GSMUA_Achr10P...	Banana	mitochondrion	85.76	51.98
TraesCS5A01G248900.1	Wheat	golgi, unclear	83.38	51.47
TraesCS5B01G246600.1	Wheat	plastid	83.68	51.27
Zm00001d005950_P001	Maize	plastid	84.27	51.26
TraesCS5D01G256100.1	Wheat	mitochondrion, plastid	83.38	51.09
HORVU7Hr1G063220.1	Barley	plastid	83.98	50.9
Solyc01g105540.2.1	Tomato	plastid	86.05	50.88
CDY43805	Canola	plastid	83.38	50.63
Bra024282.1-P	Field mustard	plastid	83.38	50.63
TraesCS7A01G285000.1	Wheat	golgi	83.38	50.54
TraesCS7B01G199700.1	Wheat	plasma membrane, plastid	83.38	50.54
TraesCS7D01G283000.1	Wheat	unclear	83.38	50.54
EER96900	Sorghum	plastid	83.38	50.45
CDX81219	Canola	plastid	82.79	50.18
CDX84512	Canola	plastid	83.09	49.82
AT5G64290.1	Thale cress	plastid	83.09	49.73
VIT_03s0017g00640.t01	Wine grape	plastid	83.09	49.65
Bra037771.1-P	Field mustard	plastid	82.79	49.56
PGSC0003DMT400032652	Potato	plastid	85.76	49.49
CDY18717	Canola	plastid	82.49	49.38
EES15485	Sorghum	plastid	80.12	49.0
HORVU5Hr1G070230.1	Barley	plastid	83.09	48.95
Zm00001d031253_P001	Maize	plastid	79.23	48.46
EES14336	Sorghum	golgi, plastid, vacuole	75.67	48.3
KRH43882	Soybean	endoplasmic reticulum, plastid	79.82	48.29
KRH10575	Soybean	plastid	79.53	47.69
EES04490	Sorghum	plastid	78.34	46.89
AT5G64280.1	Thale cress	plastid	70.33	43.17
Bra031926.1-P	Field mustard	plastid	70.62	42.81
CDY31328	Canola	plastid	70.62	42.73
Zm00001d020803_P001	Maize	peroxisome	19.58	39.76
CDY46791	Canola	plasma membrane	70.62	36.23
GSMUA_Achr4P03580_001	Banana	plastid	43.03	28.38
GSMUA_Achr7P27130_001	Banana	plastid	40.65	25.18
Os09t0469950-00	Rice	plasma membrane	13.35	15.96
PGSC0003DMT400017518	Potato	plastid	5.93	7.38

Protein Annotations

EnsemblPlants:GSMUA_Achr5P17890_001	EnsemblPlants:GSMUA_Achr5T17890_001	EnsemblPlantsGene:GSMUA_Achr5G17890_001	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0006814	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
InterPro:CitT-rel	InterPro:SLC13A/DASS	PANTHER:PTHR42826	PANTHER:PTHR42826:SF4	PFAM:PF00939	SEG:seg
TIGRFAMs:TIGR00785	TMHMM:TMhelix	UniParc:UPI000295FEF3	UniProt:M0SZG8	MapMan:24.2.7.1.2	:

Description

Putative 2-oxoglutarate/malate translocator, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr5G17890_001]

Coordinates

chr5:-:19084018..19089823

Molecular Weight (calculated)

35899.0 Da

IEP (calculated)

7.939

GRAVY (calculated)

0.716

Length

337 amino acids

Sequence
(BLAST)

001: MPSTTARAGG VFLPIIKSLS LSSGSKPGDR SAGKLGSYLV MSQFQAACNS SALFLTAAAQ NLLCLKLAEE LGVKISSPWV SWFKAASLPA IVSLLATPYI
101: LYKLFPPEVK DTPDAPALAT KKLEQMGPIT TNEWVMVGTM VLAVSLWVFG DALGIPSVVA AMLGLSILLL LGVLNWDDCL SEKSAWDTLA WFAVLVGMAS
201: QLTNLGIVTW MSNCVAKFLQ SFSLSWPAAL SVLQASYFLI HYLFASQTAH VGALYSAFLA MHLAAGVPGA LAALALAYNT NLFGSLTHYS SGQAAVYYGA
301: GYVELPDVFR LGFIVAAVNA LIWGVVGTFW WKFLGLY

Best Arabidopsis Sequence Match ( AT5G64290.1 )
(BLAST)

001: MESFALHSLS TTATSTLLSH HHHHHPSRLS LLRRTSSRSP PSTISLRSLS VQPLSFPLLK PIPRFSTRIA AAPQDNAPPP PPPSPSPSPS PQGAKLIPLI
101: LSISVGLILR FAVPVPEGVT PQGWQLLSIF LSTIAGLVLS PLPVGAWAFI GLTASIVTKT LSFSAAFSAF TSEVIWLIVI SFFFARGFVK TGLGDRIATY
201: FVKWLGKSTL GLSYGLTLSE ALIAPAMPST TARAGGIFLP IIKSLSLSAG SKPNDSSSRK LGSYLIQSQF QCAGNSSALF LTAAAQNLLC LKLAEELGVV
301: ISNPWVSWFK AASLPAIISL LCTPLILYKL YPPETKDTPE APGIAATKLK QMGPVTKNEW IMVGTMLLAV TLWICGETLG IPSVVAAMIG LSILLVLGVL
401: NWDDCLSEKS AWDTLAWFAV LVGMAGQLTN LGVVTWMSDC VAKVLQSLSL SWPAAFGLLQ AAYFFIHYLF ASQTGHVGAL FSAFLAMHIA AGVPGILAAL
501: ALAYNTNLFG ALTHYSSGQA AVYYGAGYVD LPDVFKIGFV MATINAIIWG VVGTFWWKFL GLY

Arabidopsis Description

DIT2-1Dicarboxylate transporter 2.1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FMF7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.