Factsheet for Os09t0469950-00

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 8
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704
plasma membrane: 28056797

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400017518	Potato	plastid	50.0	52.03
EER96900	Sorghum	plastid	73.05	36.98
TraesCS5A01G248900.1	Wheat	golgi, unclear	69.86	36.08
Zm00001d005950_P001	Maize	plastid	70.21	35.74
TraesCS5D01G256100.1	Wheat	mitochondrion, plastid	69.15	35.45
TraesCS5B01G246600.1	Wheat	plastid	68.44	35.09
HORVU5Hr1G070230.1	Barley	plastid	68.79	33.92
EES04490	Sorghum	plastid	67.02	33.57
GSMUA_Achr10P...	Banana	mitochondrion	59.93	30.4
CDX81219	Canola	plastid	58.16	29.5
Bra024282.1-P	Field mustard	plastid	57.8	29.37
AT5G64290.1	Thale cress	plastid	58.51	29.31
CDY18717	Canola	plastid	58.51	29.31
Bra037771.1-P	Field mustard	plastid	58.51	29.31
CDY43805	Canola	plastid	57.45	29.19
PGSC0003DMT400032652	Potato	plastid	60.28	29.11
CDX84512	Canola	plastid	57.8	29.0
KRH10575	Soybean	plastid	57.45	28.83
VIT_03s0017g00640.t01	Wine grape	plastid	56.03	28.01
Solyc01g105540.2.1	Tomato	plastid	55.67	27.54
KRH43882	Soybean	endoplasmic reticulum, plastid	53.55	27.11
CDY31328	Canola	plastid	53.19	26.93
Bra031926.1-P	Field mustard	plastid	52.84	26.8
AT5G64280.1	Thale cress	plastid	51.77	26.59
CDY46791	Canola	plasma membrane	52.48	22.53
Os12t0515400-01	Rice	plastid	37.94	19.53
GSMUA_Achr5P17890_001	Banana	mitochondrion, plasma membrane, plastid	15.96	13.35
GSMUA_Achr10P...	Banana	mitochondrion, plasma membrane, plastid	14.54	12.17
KRH18862	Soybean	golgi, plasma membrane, vacuole	4.96	5.71
Os08t0481800-01	Rice	plastid	1.42	1.67
Os09t0470000-01	Rice	endoplasmic reticulum, mitochondrion, plasma membrane	0.0	0.0

Protein Annotations

EnsemblPlants:Os09t0469950-00	EnsemblPlantsGene:Os09g0469950	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006814	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:CitT-rel
InterPro:SLC13A/DASS	PANTHER:PTHR42826	PANTHER:PTHR42826:SF1	PFAM:PF00939	ProteinID:BAT08546.1	SEG:seg
TMHMM:TMhelix	UniParc:UPI00039392CE	UniProt:A0A0N7KQY9	MapMan:24.2.7.1.2	:	:

Description

Similar to plastidic general dicarboxylate transporter. (Os09t0469950-00)

Coordinates

chr9:+:17881824..17883034

Molecular Weight (calculated)

30194.0 Da

IEP (calculated)

10.898

GRAVY (calculated)

0.349

Length

282 amino acids

Sequence
(BLAST)

001: MESLRIAASH RPPLLLPSPH QLRRRHIAAV SLSLPHTSLS LSSHHHHHHR LAPTPLRRRI PPLLASQTPN PEADSPAPAG TKLAPLLVSL AVGLAVRFLA
101: PRPPEVSPQA WQLLSIFLST IAGLVLGPLP VGAWAFLGLT AAVATHTLPF AAAFSAFTNE VIWLIVISFF FARGFVKTGL GDRIATYFVK WLGGSTLGLS
201: YGLTISEAFI SPAMPSTTAR AGGVFLPIIK SLSLSAGSKP NHPSSRKLGS YLVMSQFQQG TIATCIDYYC VLPLGSAQVE WE

Best Arabidopsis Sequence Match ( AT5G64290.1 )
(BLAST)

001: MESFALHSLS TTATSTLLSH HHHHHPSRLS LLRRTSSRSP PSTISLRSLS VQPLSFPLLK PIPRFSTRIA AAPQDNAPPP PPPSPSPSPS PQGAKLIPLI
101: LSISVGLILR FAVPVPEGVT PQGWQLLSIF LSTIAGLVLS PLPVGAWAFI GLTASIVTKT LSFSAAFSAF TSEVIWLIVI SFFFARGFVK TGLGDRIATY
201: FVKWLGKSTL GLSYGLTLSE ALIAPAMPST TARAGGIFLP IIKSLSLSAG SKPNDSSSRK LGSYLIQSQF QCAGNSSALF LTAAAQNLLC LKLAEELGVV
301: ISNPWVSWFK AASLPAIISL LCTPLILYKL YPPETKDTPE APGIAATKLK QMGPVTKNEW IMVGTMLLAV TLWICGETLG IPSVVAAMIG LSILLVLGVL
401: NWDDCLSEKS AWDTLAWFAV LVGMAGQLTN LGVVTWMSDC VAKVLQSLSL SWPAAFGLLQ AAYFFIHYLF ASQTGHVGAL FSAFLAMHIA AGVPGILAAL
501: ALAYNTNLFG ALTHYSSGQA AVYYGAGYVD LPDVFKIGFV MATINAIIWG VVGTFWWKFL GLY

Arabidopsis Description

DIT2-1Dicarboxylate transporter 2.1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FMF7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.