Factsheet for HORVU5Hr1G070230.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plasma membrane, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plasma membrane
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G256100.1	Wheat	mitochondrion, plastid	91.08	94.73
Os09t0470000-01	Rice	endoplasmic reticulum, mitochondrion, plasma membrane	16.61	94.06
TraesCS5A01G248900.1	Wheat	golgi, unclear	89.69	93.96
TraesCS5B01G246600.1	Wheat	plastid	89.86	93.45
GSMUA_Achr5P17890_001	Banana	mitochondrion, plasma membrane, plastid	48.95	83.09
GSMUA_Achr10P...	Banana	mitochondrion, plasma membrane, plastid	48.43	82.2
EER96900	Sorghum	plastid	79.02	81.15
Zm00001d005950_P001	Maize	plastid	78.5	81.05
HORVU7Hr1G063220.1	Barley	plastid	74.3	76.44
EES04490	Sorghum	plastid	73.78	74.96
GSMUA_Achr10P...	Banana	mitochondrion	68.88	70.86
KRH18862	Soybean	golgi, plasma membrane, vacuole	30.24	70.61
CDX81219	Canola	plastid	67.66	69.6
Bra024282.1-P	Field mustard	plastid	67.48	69.55
CDY43805	Canola	plastid	67.31	69.37
CDX84512	Canola	plastid	67.66	68.86
Os09t0469950-00	Rice	plasma membrane	33.92	68.79
AT5G64290.1	Thale cress	plastid	67.66	68.74
PGSC0003DMT400032652	Potato	plastid	70.1	68.66
CDY18717	Canola	plastid	67.48	68.56
Bra037771.1-P	Field mustard	plastid	67.48	68.56
VIT_03s0017g00640.t01	Wine grape	plastid	67.13	68.09
Solyc01g105540.2.1	Tomato	plastid	67.83	68.07
KRH10575	Soybean	plastid	65.73	66.9
KRH43882	Soybean	endoplasmic reticulum, plastid	65.03	66.79
AT5G64280.1	Thale cress	plastid	60.66	63.21
Bra031926.1-P	Field mustard	plastid	60.66	62.41
CDY31328	Canola	plastid	60.66	62.3
CDY46791	Canola	plasma membrane	60.14	52.36
PGSC0003DMT400017518	Potato	plastid	24.65	52.03
HORVU5Hr1G027720.1	Barley	plastid	39.16	39.16

Protein Annotations

EnsemblPlants:HORVU5Hr1G070230.1	EnsemblPlantsGene:HORVU5Hr1G070230	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006814	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:CitT-rel
InterPro:SLC13A/DASS	PANTHER:PTHR42826	PANTHER:PTHR42826:SF4	PFAM:PF00939	SEG:seg	TIGRFAMs:TIGR00785
TMHMM:TMhelix	UniParc:UPI000B466895	UniProt:A0A287RPN8	MapMan:24.2.7.1.2	:	:

Description

No Description!

Coordinates

chrchr5H:-:527385714..527389690

Molecular Weight (calculated)

61256.4 Da

IEP (calculated)

9.869

GRAVY (calculated)

0.574

Length

572 amino acids

Sequence
(BLAST)

001: LKPPPAFAPG PFRPPPAPME RLRIAVSHRP PLPIRAPNHL RRRQLHLPAP LPLTLASRPL SSQHRLLSPT PRRHARRLLA SQSPVPESDP EPDVEAGAAP
101: AGAKLVPLVV SLAAGLAVRF LAPRPAEVTL QAWQLLSIFL STIAGLVLGP LPVGAWAFVG LTTAVATQTL PFEAAFSAFT NEVIWLIVIS FFFARGFVKT
201: GLGDRIATYF IKWLGGSTLG LSYGLTVSEA CIAPAMPSTT ARAGGVFLPI IKSLALSAGS KPNDQSSRKL GSYLVMTQFQ AGSNSSALFL TAAAQNLLCL
301: KLAEELGIIV ANPWVSWFQA ASLPAIVSLL ATPYLLYKIF PPEIKDTPEA PALAAEKLKR MGPVTKNEWV MIGTMILAVS LWVFGDAIGV SSVVAAMLGL
401: SILLLLGVLD WDDCLSEKSA WDTLSWFAVL VAMAGQLTNF GIVSWMSTSV AKLLESFSLS WPAAFVVLEA SYFLIHYLFA SQTGHVGALY SAFLAMHVAA
501: GVPRVLSALA LAFSTNLFGA LTHYSSGQAA VYFGAGYLEL PDIFRLGFIT ALINALIWGV VGTFWWKFLG LY

Best Arabidopsis Sequence Match ( AT5G64290.1 )
(BLAST)

001: MESFALHSLS TTATSTLLSH HHHHHPSRLS LLRRTSSRSP PSTISLRSLS VQPLSFPLLK PIPRFSTRIA AAPQDNAPPP PPPSPSPSPS PQGAKLIPLI
101: LSISVGLILR FAVPVPEGVT PQGWQLLSIF LSTIAGLVLS PLPVGAWAFI GLTASIVTKT LSFSAAFSAF TSEVIWLIVI SFFFARGFVK TGLGDRIATY
201: FVKWLGKSTL GLSYGLTLSE ALIAPAMPST TARAGGIFLP IIKSLSLSAG SKPNDSSSRK LGSYLIQSQF QCAGNSSALF LTAAAQNLLC LKLAEELGVV
301: ISNPWVSWFK AASLPAIISL LCTPLILYKL YPPETKDTPE APGIAATKLK QMGPVTKNEW IMVGTMLLAV TLWICGETLG IPSVVAAMIG LSILLVLGVL
401: NWDDCLSEKS AWDTLAWFAV LVGMAGQLTN LGVVTWMSDC VAKVLQSLSL SWPAAFGLLQ AAYFFIHYLF ASQTGHVGAL FSAFLAMHIA AGVPGILAAL
501: ALAYNTNLFG ALTHYSSGQA AVYYGAGYVD LPDVFKIGFV MATINAIIWG VVGTFWWKFL GLY

Arabidopsis Description

DIT2-1Dicarboxylate transporter 2.1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FMF7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.