CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d005950_P001	Maize	plastid	89.77	90.25
Os09t0470000-01	Rice	endoplasmic reticulum, mitochondrion, plasma membrane	16.34	90.1
GSMUA_Achr5P17890_001	Banana	mitochondrion, plasma membrane, plastid	50.45	83.38
TraesCS5D01G256100.1	Wheat	mitochondrion, plastid	81.33	82.36
TraesCS5A01G248900.1	Wheat	golgi, unclear	80.61	82.23
GSMUA_Achr10P...	Banana	mitochondrion, plasma membrane, plastid	49.55	81.9
TraesCS5B01G246600.1	Wheat	plastid	80.43	81.45
HORVU5Hr1G070230.1	Barley	plastid	81.15	79.02
EES04490	Sorghum	plastid	77.74	76.91
EES15485	Sorghum	plastid	73.79	74.59
Os09t0469950-00	Rice	plasma membrane	36.98	73.05
EES14336	Sorghum	golgi, plastid, vacuole	67.68	71.4
GSMUA_Achr10P...	Banana	mitochondrion	70.56	70.68
Bra024282.1-P	Field mustard	plastid	70.2	70.45
PGSC0003DMT400032652	Potato	plastid	73.79	70.38
CDY43805	Canola	plastid	70.02	70.27
KRH18862	Soybean	golgi, plasma membrane, vacuole	30.88	70.2
CDX84512	Canola	plastid	70.74	70.11
Solyc01g105540.2.1	Tomato	plastid	71.27	69.65
AT5G64290.1	Thale cress	plastid	70.38	69.63
CDX81219	Canola	plastid	69.48	69.6
CDY18717	Canola	plastid	69.66	68.92
Bra037771.1-P	Field mustard	plastid	69.66	68.92
KRH10575	Soybean	plastid	68.94	68.33
KRH43882	Soybean	endoplasmic reticulum, plastid	68.22	68.22
VIT_03s0017g00640.t01	Wine grape	plastid	68.76	67.91
AT5G64280.1	Thale cress	plastid	61.76	62.66
CDY31328	Canola	plastid	62.12	62.12
Bra031926.1-P	Field mustard	plastid	61.94	62.05
PGSC0003DMT400017518	Potato	plastid	26.57	54.61
CDY46791	Canola	plasma membrane	62.66	53.12
EES16067	Sorghum	plastid	39.32	37.5

Protein Annotations

MapMan:24.2.7.1.2	EntrezGene:8063737	UniProt:C5X322	InterPro:CitT-rel	EnsemblPlants:EER96900	ProteinID:EER96900
ProteinID:EER96900.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006814
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	PFAM:PF00939	PANTHER:PTHR42826
PANTHER:PTHR42826:SF1	InterPro:SLC13A/DASS	EnsemblPlantsGene:SORBI_3002G233700	unigene:Sbi.17183	TIGRFAMs:TIGR00785	TMHMM:TMhelix
UniParc:UPI0001A8369E	RefSeq:XP_002460379.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:62472588..62478492

Molecular Weight (calculated)

60064.7 Da

IEP (calculated)

9.077

GRAVY (calculated)

0.538

Length

557 amino acids

Sequence
(BLAST)

001: MENLHLAIAH RPPLPVPAAG HLRRRHLHLH HLPAPLSLPS TSHSLSSPHH HRLTPTLRRH LRPPLRVSQT PDANPEPEPE PESEPTGAKL VPFVISVAVG
101: LAVRFLAPRP VEVSPQAWQL LSIFLSTIAG LVLGPLPVGA WAFLGLTAAV ATRTLPFAAA FSAFTNEVIW LIVISFFFAR GFVKTGLGDR IATYFVKWLG
201: SSTLGLSYGL TISEACIAPA MPSTTARAGG VFLPIIKSLS LSAESKPNHP SSRKLGSYLV MTQFQASGNS SALFLTAAAQ NLLCLKLAEE LGVFIANPWV
301: SWFKAASLPA LAALLATPYL LYKIFPPETK DTPDAPALAE EKLKRMGPVT KNEWVMIGTM ILAVSLWVFG DAIGVPSVVA AMLGLSILLL LGVLDWDDCL
401: NEKSAWDTLA WFAVLVGMAA QLTNLGIVSW MSSCVAKLLQ SFSLSWPVAF CILEGSYFLI HYLFASQTGH VGALYSAFLA MHIAAGVPRA LSALALAFNT
501: NLFGAITHYS SGQAAVYFGA GYIELPDVFR LGFITALINT FIWGVVGTIW WKFLGLY

Best Arabidopsis Sequence Match ( AT5G64290.1 )
(BLAST)

001: MESFALHSLS TTATSTLLSH HHHHHPSRLS LLRRTSSRSP PSTISLRSLS VQPLSFPLLK PIPRFSTRIA AAPQDNAPPP PPPSPSPSPS PQGAKLIPLI
101: LSISVGLILR FAVPVPEGVT PQGWQLLSIF LSTIAGLVLS PLPVGAWAFI GLTASIVTKT LSFSAAFSAF TSEVIWLIVI SFFFARGFVK TGLGDRIATY
201: FVKWLGKSTL GLSYGLTLSE ALIAPAMPST TARAGGIFLP IIKSLSLSAG SKPNDSSSRK LGSYLIQSQF QCAGNSSALF LTAAAQNLLC LKLAEELGVV
301: ISNPWVSWFK AASLPAIISL LCTPLILYKL YPPETKDTPE APGIAATKLK QMGPVTKNEW IMVGTMLLAV TLWICGETLG IPSVVAAMIG LSILLVLGVL
401: NWDDCLSEKS AWDTLAWFAV LVGMAGQLTN LGVVTWMSDC VAKVLQSLSL SWPAAFGLLQ AAYFFIHYLF ASQTGHVGAL FSAFLAMHIA AGVPGILAAL
501: ALAYNTNLFG ALTHYSSGQA AVYYGAGYVD LPDVFKIGFV MATINAIIWG VVGTFWWKFL GLY

Arabidopsis Description

DIT2-1Dicarboxylate transporter 2.1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FMF7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.