Factsheet for Bra008876.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, plasma membrane, vacuole

Predictor Summary:

plastid 5
extracellular 3
golgi 2
plasma membrane 3
endoplasmic reticulum 2
vacuole 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G113100.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	82.49	82.49
CDY53969	Canola	plastid	99.66	53.62
AT5G12860.1	Thale cress	plastid	98.99	52.78
CDX97208	Canola	plastid	100.0	52.2
GSMUA_Achr4P03580_001	Banana	plastid	88.22	51.27
VIT_06s0004g02120.t01	Wine grape	plastid	88.89	47.23
Solyc11g065830.1.1	Tomato	plastid	86.87	46.49
PGSC0003DMT400018994	Potato	plastid	85.86	46.03
KRH24714	Soybean	plastid	85.52	45.93
KRH29718	Soybean	plastid	85.86	45.54
Os12t0515400-01	Rice	plastid	82.49	44.71
TraesCS5B01G105700.1	Wheat	plastid	82.49	43.99
TraesCS5A01G100600.1	Wheat	golgi, plastid	82.15	43.96
GSMUA_Achr7P27130_001	Banana	plastid	79.46	43.38
HORVU5Hr1G027720.1	Barley	plastid	82.15	42.66
Zm00001d023929_P001	Maize	plastid	81.14	41.7
EES16067	Sorghum	plastid	81.48	41.44
Bra024282.1-P	Field mustard	plastid	42.09	22.52
Bra037771.1-P	Field mustard	plastid	41.75	22.02
Bra031926.1-P	Field mustard	plastid	39.06	20.86

Protein Annotations

MapMan:24.2.7.1.2	EnsemblPlantsGene:Bra008876	EnsemblPlants:Bra008876.1	EnsemblPlants:Bra008876.1-P	InterPro:CitT-rel	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0006810	GO:GO:0006814	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009534
GO:GO:0009536	GO:GO:0009579	GO:GO:0009605	GO:GO:0009607	GO:GO:0009624	GO:GO:0009941
GO:GO:0009987	GO:GO:0015131	GO:GO:0015139	GO:GO:0015140	GO:GO:0015729	GO:GO:0015742
GO:GO:0016020	GO:GO:0016021	GO:GO:0019676	GO:GO:0055085	GO:GO:0071423	UniProt:M4CXC9
PFAM:PF00939	PANTHER:PTHR42826	PANTHER:PTHR42826:SF3	InterPro:SLC13A/DASS	TIGRFAMs:TIGR00785	TMHMM:TMhelix
UniParc:UPI0002543B64	SEG:seg	:	:	:	:

Description

AT5G12860 (E=8e-164) DiT1 | DiT1 (dicarboxylate transporter 1); oxoglutarate:malate antiporter

Coordinates

chrA10:+:14241500..14242862

Molecular Weight (calculated)

32237.0 Da

IEP (calculated)

8.912

GRAVY (calculated)

0.873

Length

297 amino acids

Sequence
(BLAST)

001: MLTCFQTSVI SSSMFLTAMA ANPLSANLAF NTIKQTIGWT DWAKAAIVPG IVSLIVVPFL LYLIYPPTVK SSPDAPKLAQ EKLDKMGPMS KNELIMAATL
101: FLTVGLWIFG AKLSVDAVTA AILGLSVLLV TGVVTWKECL AESVAWDTLT WFAALIAMAG YLNKYGLIEW FSQTVVKFVG GLGLSWQLSF GILVLLYFYT
201: HYFFASGAAH IGAMFTAFLS VSTALGTPPY FAALVLAFLS NLMGGLTHYG IGSAPIFYGA NYVPLSKWWG YGFLISIVNI LIWLGVGGAW WKFIGLW

Best Arabidopsis Sequence Match ( AT5G12860.1 )
(BLAST)

001: MASLALSGSC SLAFPLKSRS LSLPRPPSSS LNLTKPLRSL DSRFSLLKSP LPVSLRRRSS TLVKASSTVA SASSSPTPPL VPAPVPWQGA AIKPLLASIA
101: TGLILWFVPV PEGVTRNAWQ LLAIFLATIV GIITQPLPLG AVALMGLGAS VLTKTLTFAA AFSAFGDPIP WLIALAFFFA RGFIKTGLGN RVAYQFVRLF
201: GSSSLGLGYS LVFSEALLAP AIPSVSARAG GIFLPLVKSL CVACGSNVGD GTEHRLGSWL MLTCFQTSVI SSSMFLTAMA ANPLSANLAF NTIKQTIGWT
301: DWAKAAIVPG LVSLIVVPFL LYLIYPPTVK SSPDAPKLAQ EKLDKMGPMS KNELIMAATL FLTVGLWIFG AKLGVDAVTA AILGLSVLLV TGVVTWKECL
401: AESVAWDTLT WFAALIAMAG YLNKYGLIEW FSQTVVKFVG GLGLSWQLSF GILVLLYFYT HYFFASGAAH IGAMFTAFLS VSTALGTPPY FAALVLAFLS
501: NLMGGLTHYG IGSAPIFYGA NYVPLAKWWG YGFLISIVNI LIWLGVGGAW WKFIGLW

Arabidopsis Description

DIT1Dicarboxylate transporter 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LXV3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.