Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- cytosol 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G13500.1 | KRH22653 | AT5G22290.1 | 21798944 |
| AT4G13500.1 | KRH26664 | AT5G22290.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH14055 | Soybean | plastid | 96.03 | 96.03 |
| VIT_12s0057g01000.t01 | Wine grape | plastid | 62.7 | 66.95 |
| Bra015164.1-P | Field mustard | plastid | 63.49 | 64.52 |
| CDY06375 | Canola | plastid | 63.49 | 64.52 |
| CDY30582 | Canola | plastid | 62.7 | 63.71 |
| CDY33396 | Canola | plastid | 63.49 | 62.99 |
| EER93849 | Sorghum | plastid | 57.14 | 62.07 |
| Os03t0595300-01 | Rice | plastid | 57.94 | 61.86 |
| AT4G13500.1 | Thale cress | plastid | 60.32 | 60.8 |
| AT2G05310.1 | Thale cress | plastid | 59.52 | 60.0 |
| PGSC0003DMT400048484 | Potato | plastid | 53.17 | 58.26 |
| Solyc05g024430.2.1 | Tomato | plastid | 52.38 | 57.39 |
| Zm00001d033150_P001 | Maize | plastid | 56.35 | 56.8 |
| GSMUA_Achr4P32980_001 | Banana | plastid | 50.0 | 55.75 |
| TraesCS5B01G478600.1 | Wheat | mitochondrion, plastid | 48.41 | 50.83 |
| TraesCS5A01G466800.1 | Wheat | mitochondrion, plastid | 49.21 | 50.82 |
| TraesCS5D01G479700.1 | Wheat | plastid | 48.41 | 49.59 |
| HORVU5Hr1G111330.4 | Barley | plastid | 49.21 | 37.8 |
Protein Annotations
| EMBL:ACUP02001294 | EnsemblPlants:KRH74058 | EnsemblPlantsGene:GLYMA_02G308900 | EntrezGene:100805720 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | PANTHER:PTHR36343 | ProteinID:KRH74058 | ProteinID:KRH74058.1 | TMHMM:TMhelix | UniParc:UPI00023BD743 |
| UniProt:I1JJU3 | MapMan:35.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:-:48264660..48266797
Molecular Weight (calculated)
13852.9 Da
IEP (calculated)
10.482
GRAVY (calculated)
-0.279
Length
126 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLHLQHPNI NMAAKLTLSS PLSFKTSFLP KSPSFSPGLC SPRTNVTGVK VHAKLGGGDE QAKNGGKKKF ITREEEPQQY WQTAGEREGE NPMKTPLPYI
101: IIFGMSTPFV ILAIAFANGW IKVPVR
101: IIFGMSTPFV ILAIAFANGW IKVPVR
001: MAAKLCIPSS SFSHRTNDSI TSSSSSYSSL LALPQFFCPP SPLGFPQFKL HAKLGGGDGE VKPKDKKKFI TKDEEPEQYW QSVGEREGEN PMKTPLPYII
101: IFGMSTPFVI LAIAFANGWI KVPIR
101: IFGMSTPFVI LAIAFANGWI KVPIR
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9SJ31]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.