Factsheet for Os03t0595300-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 4
golgi 3
plasma membrane 3
endoplasmic reticulum 3
vacuole 3
mitochondrion 2
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	extracellular

plastid: 21433289

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER93849	Sorghum	plastid	64.41	65.52
TraesCS5A01G466800.1	Wheat	mitochondrion, plastid	65.25	63.11
TraesCS5B01G478600.1	Wheat	mitochondrion, plastid	63.56	62.5
GSMUA_Achr4P32980_001	Banana	plastid	59.32	61.95
VIT_12s0057g01000.t01	Wine grape	plastid	61.02	61.02
TraesCS5D01G479700.1	Wheat	plastid	63.56	60.98
Zm00001d033150_P001	Maize	plastid	63.56	60.0
KRH74058	Soybean	plastid	61.86	57.94
Solyc05g024430.2.1	Tomato	plastid	55.93	57.39
PGSC0003DMT400048484	Potato	plastid	55.93	57.39
KRH14055	Soybean	plastid	61.02	57.14
AT4G13500.1	Thale cress	plastid	60.17	56.8
CDY30582	Canola	plastid	59.32	56.45
CDY06375	Canola	plastid	59.32	56.45
Bra015164.1-P	Field mustard	plastid	59.32	56.45
CDY33396	Canola	plastid	59.32	55.12
AT2G05310.1	Thale cress	plastid	57.63	54.4
HORVU5Hr1G111330.4	Barley	plastid	63.56	45.73

Protein Annotations

MapMan:35.2	EntrezGene:4333370	ProteinID:AAO38007.1	ProteinID:ABF97434.1	EMBL:AK065923	ProteinID:BAF12510.1
ProteinID:BAS85154.1	ProteinID:EEE59445.1	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:Os03g0595300
EnsemblPlants:Os03t0595300-01	PANTHER:PTHR36343	UniProt:Q851H6	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0000002C5E
RefSeq:XP_015628353.1	SEG:seg	:	:	:	:

Description

Conserved hypothetical protein. (Os03t0595300-01)

Coordinates

chr3:-:22150420..22151574

Molecular Weight (calculated)

12783.7 Da

IEP (calculated)

11.136

GRAVY (calculated)

-0.087

Length

118 amino acids

Sequence
(BLAST)

001: MAKVALSSLL AVGGAAAFAV QPSKKTGSGL FRNRVITVRR PRISANLGGD GEVKPAGNKK KFITREEEPE QYWQAAGERK GENPMKTPLP YIIIFGMSTP
101: FVILAIAFAN GWIKVPVR

Best Arabidopsis Sequence Match ( AT4G13500.1 )
(BLAST)

001: MAAKFRISSS SFSHRASDSS TSSSSSYSSL LALPQFFCPP SPLGFPEFKL HAKLGGGDGE VKPKDKKKFI TKEEEPEQYW QSVGEREGEN PMKTPLPYII
101: IFGMSTPFVI LAIAFANGWI KVPIR

Arabidopsis Description

At4g13500 [Source:UniProtKB/TrEMBL;Acc:Q9T0H1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.