Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d033150_P001 | Maize | plastid | 70.69 | 65.6 |
| Os03t0595300-01 | Rice | plastid | 65.52 | 64.41 |
| VIT_12s0057g01000.t01 | Wine grape | plastid | 62.07 | 61.02 |
| GSMUA_Achr4P32980_001 | Banana | plastid | 58.62 | 60.18 |
| Bra015164.1-P | Field mustard | plastid | 62.93 | 58.87 |
| CDY06375 | Canola | plastid | 62.07 | 58.06 |
| TraesCS5D01G479700.1 | Wheat | plastid | 61.21 | 57.72 |
| TraesCS5A01G466800.1 | Wheat | mitochondrion, plastid | 60.34 | 57.38 |
| KRH74058 | Soybean | plastid | 62.07 | 57.14 |
| KRH14055 | Soybean | plastid | 62.07 | 57.14 |
| CDY33396 | Canola | plastid | 62.07 | 56.69 |
| TraesCS5B01G478600.1 | Wheat | mitochondrion, plastid | 58.62 | 56.67 |
| CDY30582 | Canola | plastid | 60.34 | 56.45 |
| AT2G05310.1 | Thale cress | plastid | 60.34 | 56.0 |
| AT4G13500.1 | Thale cress | plastid | 60.34 | 56.0 |
| PGSC0003DMT400048484 | Potato | plastid | 53.45 | 53.91 |
| Solyc05g024430.2.1 | Tomato | plastid | 52.59 | 53.04 |
| HORVU5Hr1G111330.4 | Barley | plastid | 58.62 | 41.46 |
Protein Annotations
| MapMan:35.2 | UniProt:C5WTA4 | EnsemblPlants:EER93849 | ProteinID:EER93849 | ProteinID:EER93849.2 | GO:GO:0000785 |
| GO:GO:0000976 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003682 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0019538 | GO:GO:0031490 | GO:GO:0032454 |
| GO:GO:0033169 | PANTHER:PTHR36343 | EnsemblPlantsGene:SORBI_3001G175700 | unigene:Sbi.5380 | TMHMM:TMhelix | UniParc:UPI00081ABE64 |
Description
hypothetical protein
Coordinates
chr1:+:14747833..14748779
Molecular Weight (calculated)
12493.4 Da
IEP (calculated)
10.416
GRAVY (calculated)
-0.013
Length
116 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKVAPPLLA AGSCTAITAQ PSSRKGAAGL FASHIVSKRA RIIAKLGGDG ELKPPGKKKF ITREEEPEQY WQTAGEREGE NPMMTPLPYI IIFGMSTPFV
101: ILAIAFANGW IKVPVR
101: ILAIAFANGW IKVPVR
001: MAAKFRISSS SFSHRASDSS TSSSSSYSSL LALPQFFCPP SPLGFPEFKL HAKLGGGDGE VKPKDKKKFI TKEEEPEQYW QSVGEREGEN PMKTPLPYII
101: IFGMSTPFVI LAIAFANGWI KVPIR
101: IFGMSTPFVI LAIAFANGWI KVPIR
Arabidopsis Description
At4g13500 [Source:UniProtKB/TrEMBL;Acc:Q9T0H1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.