Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 6
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH56106 | Soybean | extracellular, plasma membrane, vacuole | 97.02 | 97.02 |
| PGSC0003DMT400065532 | Potato | extracellular, plasma membrane, vacuole | 62.5 | 63.25 |
| Solyc07g052430.2.1 | Tomato | plasma membrane | 62.5 | 63.25 |
| Solyc07g052440.2.1 | Tomato | extracellular, plasma membrane, vacuole | 61.31 | 62.05 |
| PGSC0003DMT400065530 | Potato | plasma membrane | 60.12 | 60.84 |
| VIT_12s0059g02290.t01 | Wine grape | extracellular, plasma membrane, vacuole | 60.12 | 60.48 |
| PGSC0003DMT400079615 | Potato | extracellular | 24.4 | 58.57 |
| AT2G32380.1 | Thale cress | extracellular, plasma membrane | 56.55 | 56.55 |
| CDY49514 | Canola | extracellular | 52.98 | 52.98 |
| CDY55447 | Canola | extracellular | 35.71 | 52.63 |
| Bra015400.1-P | Field mustard | extracellular | 52.38 | 52.38 |
| CDY46841 | Canola | extracellular | 51.79 | 51.79 |
| CDY68514 | Canola | extracellular | 34.52 | 50.88 |
| Os07t0458700-01 | Rice | endoplasmic reticulum, plasma membrane | 50.0 | 50.6 |
| Bra030605.1-P | Field mustard | extracellular, plasma membrane, vacuole | 50.6 | 50.6 |
| AT1G05220.1 | Thale cress | extracellular, plasma membrane, vacuole | 47.62 | 50.0 |
| AT1G05210.1 | Thale cress | extracellular, plasma membrane, vacuole | 50.0 | 50.0 |
| GSMUA_Achr4P33520_001 | Banana | vacuole | 49.4 | 49.7 |
| EER98394 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 48.21 | 48.8 |
| GSMUA_Achr4P27700_001 | Banana | vacuole | 47.62 | 48.48 |
| Os07t0458500-00 | Rice | endoplasmic reticulum, plasma membrane | 47.02 | 47.88 |
| HORVU5Hr1G105820.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 45.24 | 46.91 |
| TraesCS5A01G438000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 44.64 | 46.3 |
| HORVU5Hr1G105780.5 | Barley | endoplasmic reticulum, plasma membrane | 44.64 | 45.73 |
| TraesCS5A01G438300.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 44.05 | 45.68 |
| TraesCS6D01G047900.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 44.05 | 45.12 |
| TraesCS5B01G440800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 43.45 | 45.06 |
| TraesCS5D01G445200.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 43.45 | 45.06 |
| TraesCS5D01G445500.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 42.86 | 44.44 |
| TraesCS5B01G441200.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 42.86 | 43.9 |
| Os03t0646400-01 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 42.26 | 42.77 |
| TraesCS6A01G041500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 42.26 | 42.52 |
| HORVU3Hr1G018080.2 | Barley | endoplasmic reticulum, plasma membrane | 41.67 | 42.42 |
| TraesCS3A01G099700.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 40.48 | 40.96 |
| HORVU6Hr1G008670.1 | Barley | golgi, plasma membrane | 43.45 | 39.46 |
| TraesCS3B01G116100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 34.52 | 39.19 |
| Zm00001d019459_P002 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 39.29 | 39.05 |
| EER98395 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 39.29 | 38.82 |
| TraesCS3D01G100000.1 | Wheat | mitochondrion | 42.86 | 38.3 |
Protein Annotations
| MapMan:35.2 | EMBL:ACUP02007247 | InterPro:EXPERA | EnsemblPlantsGene:GLYMA_12G099900 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0016020 | GO:GO:0016021 | UniProt:I1LRR4 |
| InterPro:IPR033118 | EnsemblPlants:KRH25396 | ProteinID:KRH25396 | ProteinID:KRH25396.1 | PFAM:PF10914 | PIRSF:PIRSF031032 |
| PFscan:PS51751 | PANTHER:PTHR31204 | PANTHER:PTHR31204:SF1 | InterPro:Sigma2_recept | SignalP:SignalP-TM | TMHMM:TMhelix |
| UniParc:UPI00023CFFFA | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr12:+:8675608..8677609
Molecular Weight (calculated)
18608.3 Da
IEP (calculated)
9.157
GRAVY (calculated)
0.664
Length
168 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGCVLKLVD SVLFLFFLLI AVVAPLIDAQ TCLPLSYFPD ILVQLKEQYT NDYGDYLVAE KPHFFVGLVW LELLFQWPLA LLSLYAMLTS KPWFNTTCLI
101: YGVSVTTSMV AILSEMMNSK RASEKLLTIY APFLGLGVLA LLRGLLTCSS KSSSALGKRS ALARKKRA
101: YGVSVTTSMV AILSEMMNSK RASEKLLTIY APFLGLGVLA LLRGLLTCSS KSSSALGKRS ALARKKRA
001: MGAFCKLIDA VLFLYFALMA VIAPLIDGQT SLPGDIFPAF IVDLNRWYID EFGDYLVKEK PHFLVGLVWH ELLLLWPLSI VNVYAILAGK SWFGTTSMVY
101: GASVVTSMAA ILGEMIGSGK ASEKLLMMYV PFMGVGILAL LRGLLSQSNK SGGAVGKRPA ILARRKRA
101: GASVVTSMAA ILGEMIGSGK ASEKLLMMYV PFMGVGILAL LRGLLSQSNK SGGAVGKRPA ILARRKRA
Arabidopsis Description
At2g32380 [Source:UniProtKB/TrEMBL;Acc:Q9ZV66]
SUBAcon: [plasma membrane,extracellular]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.