Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G05210.1 | Thale cress | extracellular, plasma membrane, vacuole | 63.75 | 60.71 |
| AT2G32380.1 | Thale cress | extracellular, plasma membrane | 61.25 | 58.33 |
| PGSC0003DMT400079615 | Potato | extracellular | 22.5 | 51.43 |
| Solyc07g052430.2.1 | Tomato | plasma membrane | 51.88 | 50.0 |
| PGSC0003DMT400065530 | Potato | plasma membrane | 51.88 | 50.0 |
| PGSC0003DMT400065532 | Potato | extracellular, plasma membrane, vacuole | 51.25 | 49.4 |
| Solyc07g052440.2.1 | Tomato | extracellular, plasma membrane, vacuole | 50.62 | 48.8 |
| KRH25396 | Soybean | extracellular, plasma membrane, vacuole | 50.0 | 47.62 |
| KRH56106 | Soybean | extracellular, plasma membrane, vacuole | 50.0 | 47.62 |
| VIT_12s0059g02290.t01 | Wine grape | extracellular, plasma membrane, vacuole | 48.12 | 46.11 |
| GSMUA_Achr4P27700_001 | Banana | vacuole | 45.62 | 44.24 |
| TraesCS6D01G047900.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 45.0 | 43.9 |
| HORVU5Hr1G105820.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 44.38 | 43.83 |
| TraesCS5D01G445500.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 44.38 | 43.83 |
| HORVU5Hr1G105780.5 | Barley | endoplasmic reticulum, plasma membrane | 44.38 | 43.29 |
| TraesCS5A01G438300.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 43.75 | 43.21 |
| TraesCS5A01G438000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 43.75 | 43.21 |
| GSMUA_Achr4P33520_001 | Banana | vacuole | 45.0 | 43.11 |
| TraesCS6A01G041500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 44.38 | 42.52 |
| TraesCS5D01G445200.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 42.5 | 41.98 |
| TraesCS5B01G440800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 42.5 | 41.98 |
| TraesCS5B01G441200.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 42.5 | 41.46 |
| Os07t0458700-01 | Rice | endoplasmic reticulum, plasma membrane | 42.5 | 40.96 |
| EER98394 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 42.5 | 40.96 |
| HORVU6Hr1G008670.1 | Barley | golgi, plasma membrane | 45.0 | 38.92 |
| TraesCS3A01G099700.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 40.0 | 38.55 |
| HORVU3Hr1G018080.2 | Barley | endoplasmic reticulum, plasma membrane | 39.38 | 38.18 |
| Os07t0458500-00 | Rice | endoplasmic reticulum, plasma membrane | 38.75 | 37.58 |
| TraesCS3B01G116100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 34.38 | 37.16 |
| Os03t0646400-01 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 38.12 | 36.75 |
| TraesCS3D01G100000.1 | Wheat | mitochondrion | 42.5 | 36.17 |
| EER98395 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 36.88 | 34.71 |
| Zm00001d019459_P002 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 31.88 | 30.18 |
Protein Annotations
| MapMan:35.2 | EntrezGene:839258 | ProteinID:AAB71457.1 | ProteinID:AEE27807.1 | ArrayExpress:AT1G05220 | EnsemblPlantsGene:AT1G05220 |
| RefSeq:AT1G05220 | TAIR:AT1G05220 | RefSeq:AT1G05220-TAIR-G | EnsemblPlants:AT1G05220.1 | TAIR:AT1G05220.1 | EMBL:AY735501 |
| EMBL:AY735502 | EMBL:AY924651 | InterPro:EXPERA | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR033118 |
| RefSeq:NP_172014.1 | UniProt:O23046 | PFAM:PF10914 | PIRSF:PIRSF031032 | PFscan:PS51751 | PANTHER:PTHR31204 |
| PANTHER:PTHR31204:SF3 | InterPro:Sigma2_recept | TMHMM:TMhelix | UniParc:UPI00000AA895 | : | : |
Description
Transmembrane protein 97, Putative [Source:UniProtKB/TrEMBL;Acc:O23046]
Coordinates
chr1:+:1511895..1512842
Molecular Weight (calculated)
17837.5 Da
IEP (calculated)
9.854
GRAVY (calculated)
0.845
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MGALGKLINI SLFFFFALMA INVPLLNGQI LFPGIYPKLL TDLKDWYSSE FNDYLFIEKP LFFVGLVWHE IIFLLPLSIV NIYAILTSKS WFGTTSLLYG
101: ASFLTSMAAI LGDMIGSEKV TNKLLLAYLP FVGLAILAML RGLVTCSTKR STVLARRKLA
101: ASFLTSMAAI LGDMIGSEKV TNKLLLAYLP FVGLAILAML RGLVTCSTKR STVLARRKLA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.