Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 8
- golgi 5
- nucleus 1
- peroxisome 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g052440.2.1 | Tomato | extracellular, plasma membrane, vacuole | 96.99 | 96.99 |
| PGSC0003DMT400065532 | Potato | extracellular, plasma membrane, vacuole | 85.54 | 85.54 |
| PGSC0003DMT400079615 | Potato | extracellular | 33.13 | 78.57 |
| KRH56106 | Soybean | extracellular, plasma membrane, vacuole | 60.84 | 60.12 |
| KRH25396 | Soybean | extracellular, plasma membrane, vacuole | 60.84 | 60.12 |
| VIT_12s0059g02290.t01 | Wine grape | extracellular, plasma membrane, vacuole | 58.43 | 58.08 |
| AT2G32380.1 | Thale cress | extracellular, plasma membrane | 57.83 | 57.14 |
| AT1G05210.1 | Thale cress | extracellular, plasma membrane, vacuole | 56.63 | 55.95 |
| Bra015400.1-P | Field mustard | extracellular | 56.02 | 55.36 |
| CDY49514 | Canola | extracellular | 56.02 | 55.36 |
| CDY46841 | Canola | extracellular | 55.42 | 54.76 |
| CDY55447 | Canola | extracellular | 37.35 | 54.39 |
| CDY68514 | Canola | extracellular | 37.35 | 54.39 |
| AT1G05220.1 | Thale cress | extracellular, plasma membrane, vacuole | 50.0 | 51.88 |
| Bra030605.1-P | Field mustard | extracellular, plasma membrane, vacuole | 52.41 | 51.79 |
| Os07t0458700-01 | Rice | endoplasmic reticulum, plasma membrane | 50.0 | 50.0 |
| TraesCS6D01G047900.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 46.39 | 46.95 |
| GSMUA_Achr4P27700_001 | Banana | vacuole | 46.39 | 46.67 |
| EER98394 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 46.39 | 46.39 |
| HORVU5Hr1G105780.5 | Barley | endoplasmic reticulum, plasma membrane | 45.18 | 45.73 |
| TraesCS6A01G041500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 45.78 | 45.51 |
| GSMUA_Achr4P33520_001 | Banana | vacuole | 45.78 | 45.51 |
| HORVU5Hr1G105820.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 43.98 | 45.06 |
| TraesCS5A01G438000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 42.77 | 43.83 |
| TraesCS5A01G438300.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 42.77 | 43.83 |
| TraesCS5B01G440800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 42.17 | 43.21 |
| TraesCS5D01G445200.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 42.17 | 43.21 |
| TraesCS5D01G445500.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 41.57 | 42.59 |
| Os07t0458500-00 | Rice | endoplasmic reticulum, plasma membrane | 42.17 | 42.42 |
| HORVU3Hr1G018080.2 | Barley | endoplasmic reticulum, plasma membrane | 42.17 | 42.42 |
| TraesCS3B01G116100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 37.35 | 41.89 |
| TraesCS3A01G099700.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 41.57 | 41.57 |
| TraesCS5B01G441200.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 40.96 | 41.46 |
| HORVU6Hr1G008670.1 | Barley | golgi, plasma membrane | 45.18 | 40.54 |
| Os03t0646400-01 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 40.36 | 40.36 |
| EER98395 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 39.76 | 38.82 |
| TraesCS3D01G100000.1 | Wheat | mitochondrion | 42.77 | 37.77 |
| Zm00001d019459_P002 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 35.54 | 34.91 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400065530 | EnsemblPlantsGene:PGSC0003DMG400025496 | EntrezGene:102583195 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:EXPERA | InterPro:IPR033118 | InterPro:Sigma2_recept | PANTHER:PTHR31204 | PANTHER:PTHR31204:SF1 | PFAM:PF10914 |
| PFscan:PS51751 | PGSC:PGSC0003DMG400025496 | PIRSF:PIRSF031032 | RefSeq:XP_006367281.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI000294BC4C | UniProt:M1CE64 | MapMan:35.2 | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400025496]
Coordinates
chr7:+:47070858..47073179
Molecular Weight (calculated)
18517.2 Da
IEP (calculated)
9.741
GRAVY (calculated)
0.641
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGFVKLLDL LLFIYFFFMA IVAPLFDGQT ALPKHIFHPV LVDLKSWYTQ ECGDYLVSEK PHFFVGLIWL ELLFAWPICL LSLYAIAAGK SWIKTTSLLY
101: GVSTLTSMVA ILSEMKGSEK ASDKLLMVYY PFLGFAVLAI LRGLLPHSSK SVSIGKGSTI SRKKRA
101: GVSTLTSMVA ILSEMKGSEK ASDKLLMVYY PFLGFAVLAI LRGLLPHSSK SVSIGKGSTI SRKKRA
001: MGAFCKLIDA VLFLYFALMA VIAPLIDGQT SLPGDIFPAF IVDLNRWYID EFGDYLVKEK PHFLVGLVWH ELLLLWPLSI VNVYAILAGK SWFGTTSMVY
101: GASVVTSMAA ILGEMIGSGK ASEKLLMMYV PFMGVGILAL LRGLLSQSNK SGGAVGKRPA ILARRKRA
101: GASVVTSMAA ILGEMIGSGK ASEKLLMMYV PFMGVGILAL LRGLLSQSNK SGGAVGKRPA ILARRKRA
Arabidopsis Description
At2g32380 [Source:UniProtKB/TrEMBL;Acc:Q9ZV66]
SUBAcon: [plasma membrane,extracellular]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.