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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • nucleus 1
  • extracellular 6
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 5
  • golgi 4
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY46841 Canola extracellular 97.62 97.62
CDY49514 Canola extracellular 97.02 97.02
AT1G05210.1 Thale cress extracellular, plasma membrane, vacuole 83.33 83.33
Bra030605.1-P Field mustard extracellular, plasma membrane, vacuole 80.95 80.95
PGSC0003DMT400079615 Potato extracellular 23.81 57.14
PGSC0003DMT400065530 Potato plasma membrane 55.36 56.02
Solyc07g052430.2.1 Tomato plasma membrane 54.76 55.42
Solyc07g052440.2.1 Tomato extracellular, plasma membrane, vacuole 54.17 54.82
PGSC0003DMT400065532 Potato extracellular, plasma membrane, vacuole 54.17 54.82
VIT_12s0059g02290.t01 Wine grape extracellular, plasma membrane, vacuole 53.57 53.89
KRH56106 Soybean extracellular, plasma membrane, vacuole 52.98 52.98
KRH25396 Soybean extracellular, plasma membrane, vacuole 52.38 52.38
HORVU5Hr1G105820.1 Barley endoplasmic reticulum, plasma membrane, vacuole 48.21 50.0
Os07t0458700-01 Rice endoplasmic reticulum, plasma membrane 48.81 49.4
GSMUA_Achr4P33520_001 Banana vacuole 48.81 49.1
HORVU5Hr1G105780.5 Barley endoplasmic reticulum, plasma membrane 47.62 48.78
TraesCS5A01G438000.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 47.02 48.77
GSMUA_Achr4P27700_001 Banana vacuole 46.43 47.27
TraesCS5A01G438300.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 44.64 46.3
TraesCS5B01G440800.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 44.64 46.3
TraesCS5D01G445200.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 44.64 46.3
EER98394 Sorghum endoplasmic reticulum, plasma membrane, vacuole 45.24 45.78
TraesCS5D01G445500.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 44.05 45.68
TraesCS5B01G441200.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 43.45 44.51
TraesCS6D01G047900.1 Wheat endoplasmic reticulum, extracellular, vacuole 42.86 43.9
Os07t0458500-00 Rice endoplasmic reticulum, plasma membrane 42.86 43.64
TraesCS6A01G041500.1 Wheat endoplasmic reticulum, extracellular, vacuole 42.86 43.11
HORVU3Hr1G018080.2 Barley endoplasmic reticulum, plasma membrane 41.67 42.42
TraesCS3A01G099700.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 41.67 42.17
HORVU6Hr1G008670.1 Barley golgi, plasma membrane 45.24 41.08
Os03t0646400-01 Rice endoplasmic reticulum, plasma membrane, vacuole 39.29 39.76
EER98395 Sorghum endoplasmic reticulum, plasma membrane, vacuole 39.88 39.41
TraesCS3B01G116100.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 34.52 39.19
TraesCS3D01G100000.1 Wheat mitochondrion 41.67 37.23
Zm00001d019459_P002 Maize endoplasmic reticulum, plasma membrane, vacuole 33.33 33.14
Protein Annotations
EnsemblPlants:Bra015400.1EnsemblPlants:Bra015400.1-PEnsemblPlantsGene:Bra015400GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:EXPERAInterPro:IPR033118InterPro:Sigma2_receptPANTHER:PTHR31204PANTHER:PTHR31204:SF3PFAM:PF10914
PFscan:PS51751PIRSF:PIRSF031032SEG:segTMHMM:TMhelixUniParc:UPI0002543AC7UniProt:M4DFX7
MapMan:35.2:::::
Description
AT1G05210 (E=2e-073) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane protein 97, predicted (InterPro:IPR016964); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G32380.1); Has 101 Blast hits to 101 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 49; Fungi - 9; Plants - 41; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Coordinates
chrA10:-:2070304..2071135
Molecular Weight (calculated)
18192.0 Da
IEP (calculated)
9.659
GRAVY (calculated)
0.779
Length
168 amino acids
Sequence
(BLAST)
001: MGAFGKLIDA ILFVCFALMA VIGPLIDGQT ALPKSIFPAF LTDLKTSYVA EFGDYLLMEK PHFLVGLVWH ELVFLWPLSI ANIYAILAGK SWFGTTCLLY
101: GASLVTSMAA ILGEMIGSGK ASERLLMMYV PFMGIGILAV LRGLVSSSTK STGSVGKRYT IMPRRKLA
Best Arabidopsis Sequence Match ( AT1G05210.1 )
(BLAST)
001: MGALGKLIDV ALFVYFVSMA IIAPLIDGQT SLPSGIYPAF LTDLKSKYIA DFGDYLLMEK PHFLVGLVWH ELLFLWPLSI ANVYAILAGK SWFGTTCLLY
101: GASLVTSMAA ILGDMIGSGK ASDRLLMMYV PFMGFGILAV LRGLVYRSTK NTGSSGKRST IMPRRKLA
Arabidopsis Description
At1g05210 [Source:UniProtKB/TrEMBL;Acc:O23047]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.