Factsheet for Solyc07g052430.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 6
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	golgi, peroxisome, plasma membrane, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc02g071920.2.1
Solyc03g005980.2.1
Solyc05g015640.2.1
Solyc06g074170.2.1
Solyc11g068750.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G32380.1	Solyc05g015640.2.1	AT1G27300.1	21798944
AT2G32380.1	Solyc02g071920.2.1	AT4G19030.1	21798944
AT2G32380.1	Solyc03g005980.2.1	AT4G19030.1	21798944
AT2G32380.1	Solyc06g074170.2.1	AT5G22290.1	21798944
AT2G32380.1	Solyc11g068750.1.1	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400065532	Potato	extracellular, plasma membrane, vacuole	93.98	93.98
PGSC0003DMT400079615	Potato	extracellular	37.35	88.57
Solyc07g052440.2.1	Tomato	extracellular, plasma membrane, vacuole	84.34	84.34
KRH56106	Soybean	extracellular, plasma membrane, vacuole	63.25	62.5
KRH25396	Soybean	extracellular, plasma membrane, vacuole	63.25	62.5
VIT_12s0059g02290.t01	Wine grape	extracellular, plasma membrane, vacuole	57.83	57.48
AT2G32380.1	Thale cress	extracellular, plasma membrane	56.63	55.95
CDY55447	Canola	extracellular	37.95	55.26
CDY68514	Canola	extracellular	37.95	55.26
Bra015400.1-P	Field mustard	extracellular	55.42	54.76
AT1G05210.1	Thale cress	extracellular, plasma membrane, vacuole	55.42	54.76
CDY46841	Canola	extracellular	54.82	54.17
CDY49514	Canola	extracellular	54.22	53.57
AT1G05220.1	Thale cress	extracellular, plasma membrane, vacuole	50.0	51.88
Bra030605.1-P	Field mustard	extracellular, plasma membrane, vacuole	52.41	51.79
Os07t0458700-01	Rice	endoplasmic reticulum, plasma membrane	48.19	48.19
TraesCS6D01G047900.1	Wheat	endoplasmic reticulum, extracellular, vacuole	47.59	48.17
GSMUA_Achr4P33520_001	Banana	vacuole	48.19	47.9
GSMUA_Achr4P27700_001	Banana	vacuole	46.99	47.27
EER98394	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	46.99	46.99
TraesCS6A01G041500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	46.99	46.71
HORVU5Hr1G105780.5	Barley	endoplasmic reticulum, plasma membrane	45.18	45.73
HORVU5Hr1G105820.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	43.98	45.06
TraesCS5A01G438300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	43.98	45.06
TraesCS5D01G445500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	42.77	43.83
Os07t0458500-00	Rice	endoplasmic reticulum, plasma membrane	43.37	43.64
TraesCS5B01G441200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	42.77	43.29
HORVU6Hr1G008670.1	Barley	golgi, plasma membrane	48.19	43.24
TraesCS5A01G438000.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	42.17	43.21
TraesCS5B01G440800.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	42.17	43.21
TraesCS5D01G445200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	42.17	43.21
HORVU3Hr1G018080.2	Barley	endoplasmic reticulum, plasma membrane	41.57	41.82
TraesCS3A01G099700.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	40.96	40.96
Os03t0646400-01	Rice	endoplasmic reticulum, plasma membrane, vacuole	40.36	40.36
TraesCS3B01G116100.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	35.54	39.86
EER98395	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	39.76	38.82
TraesCS3D01G100000.1	Wheat	mitochondrion	42.17	37.23
Zm00001d019459_P002	Maize	endoplasmic reticulum, plasma membrane, vacuole	37.35	36.69

Protein Annotations

EnsemblPlants:Solyc07g052430.2.1	EnsemblPlantsGene:Solyc07g052430.2	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0016020	GO:GO:0016021	InterPro:EXPERA	InterPro:IPR033118	InterPro:Sigma2_recept
PANTHER:PTHR31204	PANTHER:PTHR31204:SF1	PFAM:PF10914	PFscan:PS51751	PIRSF:PIRSF031032	SEG:seg
TMHMM:TMhelix	UniParc:UPI000276B823	UniProt:K4CFE2	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr7:+:60938278..60941231

Molecular Weight (calculated)

18625.6 Da

IEP (calculated)

10.422

GRAVY (calculated)

0.667

Length

166 amino acids

Sequence
(BLAST)

001: MGAFVKLLDL LLFVYFLLIA IVAPLFDGQV ALPKHIFPPV LVNLKSWYTR QYGDYLVSEK PHFFVGLIWL ELLFAWPLSI LSLYAIAAGK SWIKTTSLMY
101: GVSTLTAMVA ILSEMKNSER ASDKLLMIYY PFLGFAILAI LRGLIPHSGK SLSIGKRSVI GRKKRA

Best Arabidopsis Sequence Match ( AT2G32380.1 )
(BLAST)

001: MGAFCKLIDA VLFLYFALMA VIAPLIDGQT SLPGDIFPAF IVDLNRWYID EFGDYLVKEK PHFLVGLVWH ELLLLWPLSI VNVYAILAGK SWFGTTSMVY
101: GASVVTSMAA ILGEMIGSGK ASEKLLMMYV PFMGVGILAL LRGLLSQSNK SGGAVGKRPA ILARRKRA

Arabidopsis Description

At2g32380 [Source:UniProtKB/TrEMBL;Acc:Q9ZV66]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.