Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015400.1-P | Field mustard | extracellular | 83.33 | 83.33 |
| CDY49514 | Canola | extracellular | 83.33 | 83.33 |
| CDY46841 | Canola | extracellular | 82.74 | 82.74 |
| AT2G32380.1 | Thale cress | extracellular, plasma membrane | 73.21 | 73.21 |
| AT1G05220.1 | Thale cress | extracellular, plasma membrane, vacuole | 60.71 | 63.75 |
| PGSC0003DMT400079615 | Potato | extracellular | 23.81 | 57.14 |
| PGSC0003DMT400065530 | Potato | plasma membrane | 55.95 | 56.63 |
| Solyc07g052440.2.1 | Tomato | extracellular, plasma membrane, vacuole | 54.76 | 55.42 |
| Solyc07g052430.2.1 | Tomato | plasma membrane | 54.76 | 55.42 |
| PGSC0003DMT400065532 | Potato | extracellular, plasma membrane, vacuole | 54.17 | 54.82 |
| VIT_12s0059g02290.t01 | Wine grape | extracellular, plasma membrane, vacuole | 50.0 | 50.3 |
| KRH56106 | Soybean | extracellular, plasma membrane, vacuole | 50.0 | 50.0 |
| KRH25396 | Soybean | extracellular, plasma membrane, vacuole | 50.0 | 50.0 |
| GSMUA_Achr4P33520_001 | Banana | vacuole | 48.81 | 49.1 |
| GSMUA_Achr4P27700_001 | Banana | vacuole | 46.43 | 47.27 |
| Os07t0458700-01 | Rice | endoplasmic reticulum, plasma membrane | 46.43 | 46.99 |
| HORVU5Hr1G105780.5 | Barley | endoplasmic reticulum, plasma membrane | 45.24 | 46.34 |
| HORVU5Hr1G105820.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 44.64 | 46.3 |
| TraesCS6D01G047900.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 44.64 | 45.73 |
| TraesCS6A01G041500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 45.24 | 45.51 |
| TraesCS5A01G438000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 43.45 | 45.06 |
| EER98394 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 44.05 | 44.58 |
| TraesCS5A01G438300.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 42.86 | 44.44 |
| TraesCS5D01G445500.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 42.26 | 43.83 |
| TraesCS5D01G445200.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 42.26 | 43.83 |
| TraesCS5B01G440800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 42.26 | 43.83 |
| Os07t0458500-00 | Rice | endoplasmic reticulum, plasma membrane | 42.86 | 43.64 |
| TraesCS3A01G099700.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 42.86 | 43.37 |
| HORVU3Hr1G018080.2 | Barley | endoplasmic reticulum, plasma membrane | 42.26 | 43.03 |
| TraesCS5B01G441200.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 41.67 | 42.68 |
| HORVU6Hr1G008670.1 | Barley | golgi, plasma membrane | 46.43 | 42.16 |
| TraesCS3B01G116100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 36.31 | 41.22 |
| Os03t0646400-01 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 38.1 | 38.55 |
| TraesCS3D01G100000.1 | Wheat | mitochondrion | 42.86 | 38.3 |
| EER98395 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 37.5 | 37.06 |
| Zm00001d019459_P002 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 32.74 | 32.54 |
Protein Annotations
| MapMan:35.2 | EntrezGene:839261 | UniProt:A0A178W8R1 | ProteinID:AAB71456.1 | ProteinID:AEE27806.1 | EMBL:AK227338 |
| ArrayExpress:AT1G05210 | EnsemblPlantsGene:AT1G05210 | RefSeq:AT1G05210 | TAIR:AT1G05210 | RefSeq:AT1G05210-TAIR-G | EnsemblPlants:AT1G05210.1 |
| TAIR:AT1G05210.1 | EMBL:AY086940 | Unigene:At.42414 | EMBL:BT003054 | InterPro:EXPERA | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:IPR033118 | RefSeq:NP_563731.1 | UniProt:O23047 | ProteinID:OAP14807.1 | PFAM:PF10914 |
| PIRSF:PIRSF031032 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PFscan:PS51751 | PANTHER:PTHR31204 | PANTHER:PTHR31204:SF1 | InterPro:Sigma2_recept | TMHMM:TMhelix | UniParc:UPI000000BEB6 |
Description
At1g05210 [Source:UniProtKB/TrEMBL;Acc:O23047]
Coordinates
chr1:+:1510404..1511683
Molecular Weight (calculated)
18312.0 Da
IEP (calculated)
9.896
GRAVY (calculated)
0.644
Length
168 amino acids
Sequence
(BLAST)
(BLAST)
001: MGALGKLIDV ALFVYFVSMA IIAPLIDGQT SLPSGIYPAF LTDLKSKYIA DFGDYLLMEK PHFLVGLVWH ELLFLWPLSI ANVYAILAGK SWFGTTCLLY
101: GASLVTSMAA ILGDMIGSGK ASDRLLMMYV PFMGFGILAV LRGLVYRSTK NTGSSGKRST IMPRRKLA
101: GASLVTSMAA ILGDMIGSGK ASDRLLMMYV PFMGFGILAV LRGLVYRSTK NTGSSGKRST IMPRRKLA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.