CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra028216.1-P	Field mustard	extracellular	25.36	89.87
Bra005332.1-P	Field mustard	extracellular	25.0	89.74
CDY45229	Canola	plastid	70.0	73.68
CDY65309	Canola	plastid	68.21	68.21
CDY28991	Canola	cytosol, endoplasmic reticulum, peroxisome	44.29	55.36
AT5G66450.3	Thale cress	plastid	58.21	52.92
CDX73772	Canola	mitochondrion, plastid	45.71	51.0
CDY28990	Canola	plasma membrane	38.93	49.77
VIT_04s0023g02150.t01	Wine grape	plasma membrane	38.93	48.66
CDY52388	Canola	cytosol, endoplasmic reticulum, golgi	22.86	44.76
CDY34432	Canola	cytosol, plasma membrane, plastid	21.79	42.66
Solyc02g062570.2.1	Tomato	golgi, plasma membrane, vacuole	31.79	41.2
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	32.5	40.09
Solyc02g062580.2.1	Tomato	plasma membrane	37.14	39.25
KRH76744	Soybean	plastid	38.57	37.76
PGSC0003DMT400040097	Potato	plastid	35.36	37.36
KRH28718	Soybean	plastid	38.21	37.02
Os02t0704500-01	Rice	plastid	36.07	36.73
TraesCS6B01G299500.1	Wheat	plastid	34.64	35.66
TraesCS6D01G252100.1	Wheat	plastid	34.29	35.16
TraesCS6A01G271900.1	Wheat	mitochondrion	33.93	34.93
HORVU6Hr1G068790.1	Barley	mitochondrion	33.57	34.69
TraesCS6A01G271800.1	Wheat	plastid	33.57	34.43
PGSC0003DMT400009288	Potato	extracellular, plasma membrane, vacuole	16.43	34.33
CDX77963	Canola	cytosol, golgi, peroxisome	28.57	34.19
Solyc02g084970.2.1	Tomato	plasma membrane, plastid	33.21	33.82
TraesCS6B01G299400.1	Wheat	plastid	32.14	33.71
OQU85552	Sorghum	plastid	32.14	32.85
Zm00001d017767_P001	Maize	plastid	32.5	32.62
PGSC0003DMT400009294	Potato	cytosol, peroxisome, plasma membrane, plastid	34.64	31.39
CDX90676	Canola	golgi, peroxisome, plasma membrane	48.57	29.63
Zm00001d051561_P001	Maize	plastid	31.43	28.03

Protein Annotations

EnsemblPlants:CDY50985	EnsemblPlantsGene:GSBRNA2T00097866001	Gene3D:1.20.144.10	GO:A0A078IIU1	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:P_Acid_Pase_2/haloperoxi_sf	InterPro:P_Acid_Pase_2/haloperoxidase	PANTHER:PTHR11247	PANTHER:PTHR11247:SF25	ProteinID:CDY50985
ProteinID:CDY50985.1	SEG:seg	SMART:SM00014	SUPFAM:SSF48317	TMHMM:TMhelix	UniParc:UPI0004EDE5F8
UniProt:A0A078IIU1	MapMan:5.2.2.4	:	:	:	:

Description

BnaC02g48930DBnaC02g48930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IIU1]

Coordinates

chrLK032954:-:96628..97809

Molecular Weight (calculated)

30571.7 Da

IEP (calculated)

9.869

GRAVY (calculated)

0.337

Length

280 amino acids

Sequence
(BLAST)

001: MAAASSIALF HKPTCSFYLG PFSAPARYRS WSSIFHLNRR RLFSFSAPPK TMADLVKTHA WRDGGNIDGE ERFQAFEQEA FMKNSPSNDL VSDAGGGINA
101: VANRLSKWVL AALFGSVLLL RHDGAALWAV IGSVSNSALS VALKRILNQE RPVATLRSDP GMPSSHAQSI SFISLFTLFS VMEWLGTNEL SLFLSGLIVA
201: LASYFTWLRV SQKLHTASQV VVGAIVGSVY STLWYITWNS LVLEAFASSF SVQVAVFTAA AASALGFAVY VLLNWFKDDR

Best Arabidopsis Sequence Match ( AT5G66450.4 )
(BLAST)

001: MAASSSSLLL LHKPTYNFHF AASSVPTYIN SARFRISSSI FPLDRRRRRR IWSVSGFKSM ADLVKTNARR DGEDRFQALE QEAFISNSSS ELQNELVSDA
101: GDGIEAIANR LSKWIVAALF GSVLLLRHDG AALWAVIGSV SNSVLSVALK RILNQERPVA TLRSDPGMPS SHAQSISFIS VFSVFSVMEW LGTNVLSLFL
201: SGFILALGSY FTWLRVSQKL HTTSQVVVGA IVGSVYSTLW YVTWNSLVLE AFTSTFSVQI ALFLVAAASA LGFAVYVLLN WFKDDR

Arabidopsis Description

Phosphatidic acid phosphatase (PAP2) family protein [Source:TAIR;Acc:AT5G66450]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.