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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • mitochondrion 3
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:mitochondrion
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plastid
YLoc:mitochondrion
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G346800.3
TraesCS1B01G360800.1
TraesCS1D01G349700.1
TraesCS2A01G368500.1
TraesCS2B01G385700.2
TraesCS2D01G365300.2
TraesCS3A01G151200.1
TraesCS3A01G278800.1
TraesCS3B01G178100.1
TraesCS3B01G313000.1
TraesCS3D01G159100.1
TraesCS3D01G279100.1
TraesCS6A01G237600.1
TraesCS6B01G266100.1
TraesCS6D01G220300.1
TraesCS7A01G300700.1
TraesCS7A01G341800.1
TraesCS7B01G241100.1
TraesCS7D01G296400.1
TraesCS7D01G337800.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G50920.1 TraesCS2A01G368500.1 AT3G60600.1 21798944
AT3G50920.1 TraesCS2B01G385700.2 AT3G60600.1 21798944
AT3G50920.1 TraesCS2D01G365300.2 AT3G60600.1 21798944
AT3G50920.1 TraesCS6A01G237600.1 AT3G60600.1 21798944
AT3G50920.1 TraesCS6B01G266100.1 AT3G60600.1 21798944
AT3G50920.1 TraesCS6D01G220300.1 AT3G60600.1 21798944
AT3G50920.1 TraesCS7A01G300700.1 AT3G60600.1 21798944
AT3G50920.1 TraesCS7D01G296400.1 AT3G60600.1 21798944
AT3G50920.1 TraesCS1A01G346800.3 AT5G41600.1 21798944
AT3G50920.1 TraesCS1B01G360800.1 AT5G41600.1 21798944
AT3G50920.1 TraesCS1D01G349700.1 AT5G41600.1 21798944
AT3G50920.1 TraesCS3A01G151200.1 AT5G41600.1 21798944
AT3G50920.1 TraesCS3A01G278800.1 AT5G41600.1 21798944
AT3G50920.1 TraesCS3B01G178100.1 AT5G41600.1 21798944
AT3G50920.1 TraesCS3B01G313000.1 AT5G41600.1 21798944
AT3G50920.1 TraesCS3D01G159100.1 AT5G41600.1 21798944
AT3G50920.1 TraesCS3D01G279100.1 AT5G41600.1 21798944
AT3G50920.1 TraesCS7A01G341800.1 AT5G41600.1 21798944
AT3G50920.1 TraesCS7B01G241100.1 AT5G41600.1 21798944
AT3G50920.1 TraesCS7D01G337800.1 AT5G41600.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G271800.1 Wheat plastid 94.38 92.31
TraesCS6B01G299500.1 Wheat plastid 83.9 82.35
HORVU6Hr1G068790.1 Barley mitochondrion 81.65 80.44
OQU85552 Sorghum plastid 63.67 62.04
Os02t0704500-01 Rice plastid 59.93 58.18
Zm00001d017767_P001 Maize plastid 60.67 58.06
Zm00001d051561_P001 Maize plastid 56.93 48.41
GSMUA_Achr10P... Banana cytosol, peroxisome, plasma membrane 39.33 46.26
Solyc02g062570.2.1 Tomato golgi, plasma membrane, vacuole 35.58 43.98
VIT_04s0023g02150.t01 Wine grape plasma membrane 35.58 42.41
Bra005332.1-P Field mustard extracellular 12.36 42.31
Bra028216.1-P Field mustard extracellular 12.36 41.77
Bra006653.1-P Field mustard extracellular, plasma membrane 14.61 39.8
Bra012072.1-P Field mustard cytosol, peroxisome, plasma membrane 32.58 39.37
Bra037170.1-P Field mustard cytosol, peroxisome, plasma membrane 30.34 37.16
Solyc02g062580.2.1 Tomato plasma membrane 35.58 35.85
PGSC0003DMT400040097 Potato plastid 35.58 35.85
CDY28991 Canola cytosol, endoplasmic reticulum, peroxisome 29.96 35.71
CDY45229 Canola plastid 33.71 33.83
Solyc02g084970.2.1 Tomato plasma membrane, plastid 34.83 33.82
Bra031812.1-P Field mustard cytosol, peroxisome, plasma membrane 28.09 33.78
KRH28718 Soybean plastid 36.33 33.56
KRH76744 Soybean plastid 35.21 32.87
PGSC0003DMT400009288 Potato extracellular, plasma membrane, vacuole 16.48 32.84
AT3G50920.1 Thale cress plastid 33.71 32.26
CDY50985 Canola plastid 33.71 32.14
CDX73772 Canola mitochondrion, plastid 29.59 31.47
CDY28990 Canola plasma membrane 25.47 31.05
PGSC0003DMT400009294 Potato cytosol, peroxisome, plasma membrane, plastid 35.58 30.74
CDY65309 Canola plastid 31.84 30.36
CDY34432 Canola cytosol, plasma membrane, plastid 15.73 29.37
CDY52388 Canola cytosol, endoplasmic reticulum, golgi 15.36 28.67
CDX77963 Canola cytosol, golgi, peroxisome 23.22 26.5
Bra036849.1-P Field mustard cytosol, golgi, peroxisome 23.22 26.5
AT5G66450.3 Thale cress plastid 29.21 25.32
Bra012879.1-P Field mustard golgi, peroxisome, plasma membrane 29.96 17.43
CDX90676 Canola golgi, peroxisome, plasma membrane 29.59 17.21
Protein Annotations
EnsemblPlants:TraesCS6B01G299400.1EnsemblPlantsGene:TraesCS6B01G299400Gene3D:1.20.144.10InterPro:P_Acid_Pase_2/haloperoxi_sfInterPro:P_Acid_Pase_2/haloperoxidasePANTHER:PTHR11247
PANTHER:PTHR11247:SF25PFAM:PF01569SEG:segSUPFAM:SSF48317TMHMM:TMhelixMapMan:5.2.2.4
Description
No Description!
Coordinates
chr6B:+:537451801..537455464
Molecular Weight (calculated)
29246.1 Da
IEP (calculated)
10.619
GRAVY (calculated)
0.291
Length
267 amino acids
Sequence
(BLAST)
001: MLLSPPAPWP RVEPVRLNRL PQRKGRLLSL PRSRRLGLCM AEMAMVGGGS SREPGVSAGE GEAMLGGDKL PGPRAETAAT RWTPVEAALN RMSKWLVAGS
101: FAFAALCKRD SEIMWALMGA YANSMLSLVL KKLLNHERPA PALRSDPGMP SSHAQSIFYA ATLLVLSVFY WLGTNYLAMI IGATTIASAA YLSWLRISQR
201: LHTLNQVLVG ATVGSAFSTM WFALWHLFVR EALASSLWVK IPVGLGSEVV CVAFVIYIIR QWFKDAQ
Best Arabidopsis Sequence Match ( AT5G66450.4 )
(BLAST)
001: MAASSSSLLL LHKPTYNFHF AASSVPTYIN SARFRISSSI FPLDRRRRRR IWSVSGFKSM ADLVKTNARR DGEDRFQALE QEAFISNSSS ELQNELVSDA
101: GDGIEAIANR LSKWIVAALF GSVLLLRHDG AALWAVIGSV SNSVLSVALK RILNQERPVA TLRSDPGMPS SHAQSISFIS VFSVFSVMEW LGTNVLSLFL
201: SGFILALGSY FTWLRVSQKL HTTSQVVVGA IVGSVYSTLW YVTWNSLVLE AFTSTFSVQI ALFLVAAASA LGFAVYVLLN WFKDDR
Arabidopsis Description
Phosphatidic acid phosphatase (PAP2) family protein [Source:TAIR;Acc:AT5G66450]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.