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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:mitochondrion
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G346800.3
TraesCS1B01G360800.1
TraesCS1D01G349700.1
TraesCS2A01G368500.1
TraesCS2B01G385700.2
TraesCS2D01G365300.2
TraesCS3A01G151200.1
TraesCS3A01G278800.1
TraesCS3B01G178100.1
TraesCS3B01G313000.1
TraesCS3D01G159100.1
TraesCS3D01G279100.1
TraesCS6A01G237600.1
TraesCS6B01G266100.1
TraesCS6D01G220300.1
TraesCS7A01G300700.1
TraesCS7A01G341800.1
TraesCS7B01G241100.1
TraesCS7D01G296400.1
TraesCS7D01G337800.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G50920.1 TraesCS2A01G368500.1 AT3G60600.1 21798944
AT3G50920.1 TraesCS2B01G385700.2 AT3G60600.1 21798944
AT3G50920.1 TraesCS2D01G365300.2 AT3G60600.1 21798944
AT3G50920.1 TraesCS6A01G237600.1 AT3G60600.1 21798944
AT3G50920.1 TraesCS6B01G266100.1 AT3G60600.1 21798944
AT3G50920.1 TraesCS6D01G220300.1 AT3G60600.1 21798944
AT3G50920.1 TraesCS7A01G300700.1 AT3G60600.1 21798944
AT3G50920.1 TraesCS7D01G296400.1 AT3G60600.1 21798944
AT3G50920.1 TraesCS1A01G346800.3 AT5G41600.1 21798944
AT3G50920.1 TraesCS1B01G360800.1 AT5G41600.1 21798944
AT3G50920.1 TraesCS1D01G349700.1 AT5G41600.1 21798944
AT3G50920.1 TraesCS3A01G151200.1 AT5G41600.1 21798944
AT3G50920.1 TraesCS3A01G278800.1 AT5G41600.1 21798944
AT3G50920.1 TraesCS3B01G178100.1 AT5G41600.1 21798944
AT3G50920.1 TraesCS3B01G313000.1 AT5G41600.1 21798944
AT3G50920.1 TraesCS3D01G159100.1 AT5G41600.1 21798944
AT3G50920.1 TraesCS3D01G279100.1 AT5G41600.1 21798944
AT3G50920.1 TraesCS7A01G341800.1 AT5G41600.1 21798944
AT3G50920.1 TraesCS7B01G241100.1 AT5G41600.1 21798944
AT3G50920.1 TraesCS7D01G337800.1 AT5G41600.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6D01G252100.1 Wheat plastid 95.59 95.24
TraesCS6A01G271900.1 Wheat mitochondrion 92.65 92.65
HORVU6Hr1G068790.1 Barley mitochondrion 84.93 85.24
TraesCS6B01G299400.1 Wheat plastid 82.35 83.9
OQU85552 Sorghum plastid 65.07 64.6
Zm00001d017767_P001 Maize plastid 62.5 60.93
Os02t0704500-01 Rice plastid 61.03 60.36
Zm00001d051561_P001 Maize plastid 59.56 51.59
GSMUA_Achr10P... Banana cytosol, peroxisome, plasma membrane 42.28 50.66
VIT_04s0023g02150.t01 Wine grape plasma membrane 39.34 47.77
Solyc02g062570.2.1 Tomato golgi, plasma membrane, vacuole 37.87 47.69
Bra005332.1-P Field mustard extracellular 12.87 44.87
Bra028216.1-P Field mustard extracellular 12.87 44.3
Bra037170.1-P Field mustard cytosol, peroxisome, plasma membrane 33.09 41.28
Bra012072.1-P Field mustard cytosol, peroxisome, plasma membrane 33.09 40.72
Bra006653.1-P Field mustard extracellular, plasma membrane 14.34 39.8
Solyc02g062580.2.1 Tomato plasma membrane 38.24 39.25
PGSC0003DMT400040097 Potato plastid 37.87 38.87
Bra031812.1-P Field mustard cytosol, peroxisome, plasma membrane 30.51 37.39
Solyc02g084970.2.1 Tomato plasma membrane, plastid 37.5 37.09
KRH28718 Soybean plastid 38.6 36.33
KRH76744 Soybean plastid 37.87 36.01
PGSC0003DMT400009288 Potato extracellular, plasma membrane, vacuole 17.65 35.82
CDY45229 Canola plastid 34.93 35.71
CDY50985 Canola plastid 35.66 34.64
CDY28991 Canola cytosol, endoplasmic reticulum, peroxisome 28.31 34.38
AT3G50920.1 Thale cress plastid 34.56 33.69
CDX73772 Canola mitochondrion, plastid 30.51 33.07
PGSC0003DMT400009294 Potato cytosol, peroxisome, plasma membrane, plastid 37.13 32.69
CDY65309 Canola plastid 33.46 32.5
CDY28990 Canola plasma membrane 25.0 31.05
CDY34432 Canola cytosol, plasma membrane, plastid 15.07 28.67
CDX77963 Canola cytosol, golgi, peroxisome 23.9 27.78
Bra036849.1-P Field mustard cytosol, golgi, peroxisome 23.9 27.78
CDY52388 Canola cytosol, endoplasmic reticulum, golgi 14.34 27.27
AT5G66450.3 Thale cress plastid 30.51 26.95
CDX90676 Canola golgi, peroxisome, plasma membrane 29.41 17.43
Bra012879.1-P Field mustard golgi, peroxisome, plasma membrane 29.41 17.43
Protein Annotations
EnsemblPlants:TraesCS6B01G299500.1EnsemblPlantsGene:TraesCS6B01G299500Gene3D:1.20.144.10InterPro:P_Acid_Pase_2/haloperoxi_sfInterPro:P_Acid_Pase_2/haloperoxidasePANTHER:PTHR11247
PANTHER:PTHR11247:SF25PFAM:PF01569SEG:segSUPFAM:SSF48317TMHMM:TMhelixMapMan:5.2.2.4
Description
No Description!
Coordinates
chr6B:+:537456041..537458312
Molecular Weight (calculated)
29795.8 Da
IEP (calculated)
11.409
GRAVY (calculated)
0.325
Length
272 amino acids
Sequence
(BLAST)
001: MLLSPPAPWP RVEPARLNRP PQRKGRLLSL PRSRRPRSPR RLGVCMAEMA MVGSGSFREP GVSAGEGDAM LGGGKLPGPR AEAAVTRWTP VEAALNRMSK
101: WLVAASFALA ALWKRDAEIM WALMGAVANT VLSSILKKLL NHERPAPALR SDPGMPSSHA QSIFYAATFL VLSVFSWLGT NYLAMILGAT TVALASYLSW
201: LRVSQRLHTL NQILVGAAVG LAFSTLWFAL WHLLVRDAFA SSLWVQIPVV LGSVVFCVSF VVYIIQHWLK DE
Best Arabidopsis Sequence Match ( AT5G66450.2 )
(BLAST)
001: MADLVKTNAR RDGEDRFQAL EQEAFISNSS SELQNELVSD AGDGIEAIAN RLSKWIVAAL FGSVLLLRHD GAALWAVIGS VSNSVLSVAL KRILNQERPV
101: ATLRSDPGMP SSHAQSISFI SVFSVFSVME WLGTNVLSLF LSGFILALGS YFTWLRVSQK LHTTSQVVVG AIVGSVYSTL WYVTWNSLVL EAFTSTFSVQ
201: IALFLVAAAS ALGFAVYVLL NWFKDDR
Arabidopsis Description
Phosphatidic acid phosphatase (PAP2) family protein [Source:TAIR;Acc:AT5G66450]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.