Factsheet for Solyc02g062570.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

plastid 1
golgi 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc02g071920.2.1
Solyc03g005980.2.1
Solyc06g074170.2.1
Solyc08g081730.2.1
Solyc11g068750.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G50920.1	Solyc02g071920.2.1	AT4G19030.1	21798944
AT3G50920.1	Solyc03g005980.2.1	AT4G19030.1	21798944
AT3G50920.1	Solyc06g074170.2.1	AT5G22290.1	21798944
AT3G50920.1	Solyc11g068750.1.1	AT5G22290.1	21798944
AT3G50920.1	Solyc08g081730.2.1	AT5G41600.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g062580.2.1	Tomato	plasma membrane	70.37	57.36
VIT_04s0023g02150.t01	Wine grape	plasma membrane	54.63	52.68
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	50.0	47.58
Solyc02g084970.2.1	Tomato	plasma membrane, plastid	58.8	46.18
Bra006653.1-P	Field mustard	extracellular, plasma membrane	19.44	42.86
Bra012072.1-P	Field mustard	cytosol, peroxisome, plasma membrane	43.52	42.53
Bra037170.1-P	Field mustard	cytosol, peroxisome, plasma membrane	41.67	41.28
KRH76744	Soybean	plastid	50.93	38.46
Bra031812.1-P	Field mustard	cytosol, peroxisome, plasma membrane	39.35	38.29
KRH28718	Soybean	plastid	50.93	38.06
CDY28991	Canola	cytosol, endoplasmic reticulum, peroxisome	39.35	37.95
TraesCS6B01G299500.1	Wheat	plastid	47.69	37.87
HORVU6Hr1G068790.1	Barley	mitochondrion	47.22	37.64
Bra005332.1-P	Field mustard	extracellular	13.43	37.18
Bra028216.1-P	Field mustard	extracellular	13.43	36.71
TraesCS6D01G252100.1	Wheat	plastid	46.3	36.63
TraesCS6A01G271900.1	Wheat	mitochondrion	45.83	36.4
CDY28990	Canola	plasma membrane	36.11	35.62
TraesCS6B01G299400.1	Wheat	plastid	43.98	35.58
TraesCS6A01G271800.1	Wheat	plastid	44.91	35.53
CDY45229	Canola	plastid	43.06	34.96
OQU85552	Sorghum	plastid	43.06	33.94
Os02t0704500-01	Rice	plastid	43.06	33.82
AT3G50920.1	Thale cress	plastid	41.2	31.9
CDX73772	Canola	mitochondrion, plastid	37.04	31.87
CDY65309	Canola	plastid	41.2	31.79
CDY50985	Canola	plastid	41.2	31.79
Zm00001d017767_P001	Maize	plastid	40.74	31.54
CDY34432	Canola	cytosol, plasma membrane, plastid	20.37	30.77
CDY52388	Canola	cytosol, endoplasmic reticulum, golgi	19.44	29.37
Zm00001d051561_P001	Maize	plastid	38.89	26.75
AT5G66450.3	Thale cress	plastid	37.96	26.62
CDX77963	Canola	cytosol, golgi, peroxisome	26.39	24.36
Bra036849.1-P	Field mustard	cytosol, golgi, peroxisome	26.39	24.36
CDX90676	Canola	golgi, peroxisome, plasma membrane	38.89	18.3
Bra012879.1-P	Field mustard	golgi, peroxisome, plasma membrane	37.96	17.86

Protein Annotations

Gene3D:1.20.144.10	MapMan:5.2.2.4	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0006651	GO:GO:0008150	GO:GO:0008152
GO:GO:0008195	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016311	GO:GO:0016787	UniProt:K4B6E5	PFAM:PF01569	PANTHER:PTHR11247
PANTHER:PTHR11247:SF25	InterPro:P_Acid_Pase_2/haloperoxi_sf	InterPro:P_Acid_Pase_2/haloperoxidase	SUPFAM:SSF48317	EnsemblPlantsGene:Solyc02g062570.2	EnsemblPlants:Solyc02g062570.2.1
TMHMM:TMhelix	UniParc:UPI000276827C	:	:	:	:

Description

No Description!

Coordinates

chr2:+:34298081..34301660

Molecular Weight (calculated)

24123.5 Da

IEP (calculated)

8.248

GRAVY (calculated)

0.742

Length

216 amino acids

Sequence
(BLAST)

001: MADLLRNGDV AVKLGAFEQQ ALIHDFSTSA SARFNATLNR LSKWLVAAVF VIIFLWRHDT EALWAASGSI LNAGLSTVLK RILNHERPVS AIRSDPGMPS
101: THAQSIFYTV MFCIVSMVEY FGLNGVTAVI SVLIFAIGSY LSWLRVSQQL HTTSQVAVGA ALGFSFSVFW FWLWDAIVLD AFISHLWIQI LVVLGTVAIC
201: VSFLLYVFRY WVLEKN

Best Arabidopsis Sequence Match ( AT5G66450.2 )
(BLAST)

001: MADLVKTNAR RDGEDRFQAL EQEAFISNSS SELQNELVSD AGDGIEAIAN RLSKWIVAAL FGSVLLLRHD GAALWAVIGS VSNSVLSVAL KRILNQERPV
101: ATLRSDPGMP SSHAQSISFI SVFSVFSVME WLGTNVLSLF LSGFILALGS YFTWLRVSQK LHTTSQVVVG AIVGSVYSTL WYVTWNSLVL EAFTSTFSVQ
201: IALFLVAAAS ALGFAVYVLL NWFKDDR

Arabidopsis Description

Phosphatidic acid phosphatase (PAP2) family protein [Source:TAIR;Acc:AT5G66450]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.