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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • mitochondrion 2
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, peroxisome, plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G346800.3
TraesCS1B01G360800.1
TraesCS1D01G349700.1
TraesCS2A01G368500.1
TraesCS2B01G385700.2
TraesCS2D01G365300.2
TraesCS3A01G151200.1
TraesCS3A01G278800.1
TraesCS3B01G178100.1
TraesCS3B01G313000.1
TraesCS3D01G159100.1
TraesCS3D01G279100.1
TraesCS6A01G237600.1
TraesCS6B01G266100.1
TraesCS6D01G220300.1
TraesCS7A01G300700.1
TraesCS7A01G341800.1
TraesCS7B01G241100.1
TraesCS7D01G296400.1
TraesCS7D01G337800.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G50920.1 TraesCS2A01G368500.1 AT3G60600.1 21798944
AT3G50920.1 TraesCS2B01G385700.2 AT3G60600.1 21798944
AT3G50920.1 TraesCS2D01G365300.2 AT3G60600.1 21798944
AT3G50920.1 TraesCS6A01G237600.1 AT3G60600.1 21798944
AT3G50920.1 TraesCS6B01G266100.1 AT3G60600.1 21798944
AT3G50920.1 TraesCS6D01G220300.1 AT3G60600.1 21798944
AT3G50920.1 TraesCS7A01G300700.1 AT3G60600.1 21798944
AT3G50920.1 TraesCS7D01G296400.1 AT3G60600.1 21798944
AT3G50920.1 TraesCS1A01G346800.3 AT5G41600.1 21798944
AT3G50920.1 TraesCS1B01G360800.1 AT5G41600.1 21798944
AT3G50920.1 TraesCS1D01G349700.1 AT5G41600.1 21798944
AT3G50920.1 TraesCS3A01G151200.1 AT5G41600.1 21798944
AT3G50920.1 TraesCS3A01G278800.1 AT5G41600.1 21798944
AT3G50920.1 TraesCS3B01G178100.1 AT5G41600.1 21798944
AT3G50920.1 TraesCS3B01G313000.1 AT5G41600.1 21798944
AT3G50920.1 TraesCS3D01G159100.1 AT5G41600.1 21798944
AT3G50920.1 TraesCS3D01G279100.1 AT5G41600.1 21798944
AT3G50920.1 TraesCS7A01G341800.1 AT5G41600.1 21798944
AT3G50920.1 TraesCS7B01G241100.1 AT5G41600.1 21798944
AT3G50920.1 TraesCS7D01G337800.1 AT5G41600.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6B01G299400.1 Wheat plastid 92.31 94.38
TraesCS6A01G271900.1 Wheat mitochondrion 83.88 84.19
HORVU6Hr1G068790.1 Barley mitochondrion 81.69 82.29
OQU85552 Sorghum plastid 61.9 61.68
Os02t0704500-01 Rice plastid 60.44 60.0
Zm00001d017767_P001 Maize plastid 59.34 58.06
Zm00001d051561_P001 Maize plastid 56.78 49.36
GSMUA_Achr10P... Banana cytosol, peroxisome, plasma membrane 40.29 48.46
Solyc02g062570.2.1 Tomato golgi, plasma membrane, vacuole 35.53 44.91
Bra005332.1-P Field mustard extracellular 12.82 44.87
Bra028216.1-P Field mustard extracellular 12.82 44.3
VIT_04s0023g02150.t01 Wine grape plasma membrane 36.26 44.2
Bra012072.1-P Field mustard cytosol, peroxisome, plasma membrane 32.6 40.27
Bra006653.1-P Field mustard extracellular, plasma membrane 14.29 39.8
Bra037170.1-P Field mustard cytosol, peroxisome, plasma membrane 31.14 38.99
Solyc02g062580.2.1 Tomato plasma membrane 37.0 38.11
PGSC0003DMT400040097 Potato plastid 37.0 38.11
CDY28991 Canola cytosol, endoplasmic reticulum, peroxisome 29.67 36.16
Solyc02g084970.2.1 Tomato plasma membrane, plastid 35.9 35.64
Bra031812.1-P Field mustard cytosol, peroxisome, plasma membrane 28.94 35.59
CDY45229 Canola plastid 34.07 34.96
PGSC0003DMT400009288 Potato extracellular, plasma membrane, vacuole 16.85 34.33
KRH28718 Soybean plastid 36.26 34.26
AT3G50920.1 Thale cress plastid 34.43 33.69
CDY50985 Canola plastid 34.43 33.57
KRH76744 Soybean plastid 35.16 33.57
PGSC0003DMT400009294 Potato cytosol, peroxisome, plasma membrane, plastid 37.0 32.69
CDX73772 Canola mitochondrion, plastid 29.67 32.27
CDY65309 Canola plastid 32.6 31.79
CDY28990 Canola plasma membrane 25.27 31.51
CDY34432 Canola cytosol, plasma membrane, plastid 15.75 30.07
CDY52388 Canola cytosol, endoplasmic reticulum, golgi 15.38 29.37
CDX77963 Canola cytosol, golgi, peroxisome 23.08 26.92
Bra036849.1-P Field mustard cytosol, golgi, peroxisome 23.08 26.92
AT5G66450.3 Thale cress plastid 30.04 26.62
Bra012879.1-P Field mustard golgi, peroxisome, plasma membrane 30.04 17.86
CDX90676 Canola golgi, peroxisome, plasma membrane 29.67 17.65
Protein Annotations
EnsemblPlants:TraesCS6A01G271800.1EnsemblPlantsGene:TraesCS6A01G271800Gene3D:1.20.144.10InterPro:P_Acid_Pase_2/haloperoxi_sfPANTHER:PTHR11247PANTHER:PTHR11247:SF25
SEG:segSUPFAM:SSF48317TMHMM:TMhelixMapMan:5.2.2.4::
Description
No Description!
Coordinates
chr6A:+:498808925..498811019
Molecular Weight (calculated)
30289.2 Da
IEP (calculated)
10.999
GRAVY (calculated)
0.161
Length
273 amino acids
Sequence
(BLAST)
001: MLLSPPAPWP RVEPVRLNRL PQRKDRLLSL PRSRRPRSPR RLVLCMAEMA MVGRGSSREP GVSAGEGEAM LGGDKLPGQR AEAAATRWTP VEAALNGMSK
101: WLVAGSFAFV ALWKRDSEIM WALMGAQANS MLSSVLKKLL NHERPAPALR SDPGMPSSHA QSIFYAATLL VLSVFYWLGT NYLAMIIGAT TIASASYLSW
201: LRISQRLHTL NQVLVGATVG SAFSTMWFAL WHLFVREAFA SSLWVKIPVG LGSEVFCVAF VVYIIRQWFK DEQ
Best Arabidopsis Sequence Match ( AT5G66450.4 )
(BLAST)
001: MAASSSSLLL LHKPTYNFHF AASSVPTYIN SARFRISSSI FPLDRRRRRR IWSVSGFKSM ADLVKTNARR DGEDRFQALE QEAFISNSSS ELQNELVSDA
101: GDGIEAIANR LSKWIVAALF GSVLLLRHDG AALWAVIGSV SNSVLSVALK RILNQERPVA TLRSDPGMPS SHAQSISFIS VFSVFSVMEW LGTNVLSLFL
201: SGFILALGSY FTWLRVSQKL HTTSQVVVGA IVGSVYSTLW YVTWNSLVLE AFTSTFSVQI ALFLVAAASA LGFAVYVLLN WFKDDR
Arabidopsis Description
Phosphatidic acid phosphatase (PAP2) family protein [Source:TAIR;Acc:AT5G66450]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.