Factsheet for AT3G50920.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra006653.1-P	Field mustard	extracellular, plasma membrane	24.73	70.41
CDY28991	Canola	cytosol, endoplasmic reticulum, peroxisome	55.56	69.2
CDX73772	Canola	mitochondrion, plastid	52.33	58.17
CDY28990	Canola	plasma membrane	43.73	55.71
CDY52388	Canola	cytosol, endoplasmic reticulum, golgi	27.6	53.85
CDY34432	Canola	cytosol, plasma membrane, plastid	26.16	51.05
VIT_04s0023g02150.t01	Wine grape	plasma membrane	36.56	45.54
AT5G66450.3	Thale cress	plastid	49.1	44.48
Solyc02g062570.2.1	Tomato	golgi, plasma membrane, vacuole	31.9	41.2
CDX77963	Canola	cytosol, golgi, peroxisome	34.05	40.6
Bra036849.1-P	Field mustard	cytosol, golgi, peroxisome	34.05	40.6
Solyc02g062580.2.1	Tomato	plasma membrane	37.28	39.25
KRH76744	Soybean	plastid	40.14	39.16
KRH28718	Soybean	plastid	40.5	39.1
PGSC0003DMT400040097	Potato	plastid	36.2	38.11
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	30.82	37.89
TraesCS6A01G271900.1	Wheat	mitochondrion	35.13	36.03
HORVU6Hr1G068790.1	Barley	mitochondrion	34.77	35.79
Os02t0704500-01	Rice	plastid	35.13	35.64
TraesCS6D01G252100.1	Wheat	plastid	34.77	35.53
OQU85552	Sorghum	plastid	34.77	35.4
TraesCS6B01G299500.1	Wheat	plastid	33.69	34.56
TraesCS6A01G271800.1	Wheat	plastid	33.69	34.43
TraesCS6B01G299400.1	Wheat	plastid	32.26	33.71
CDX90676	Canola	golgi, peroxisome, plasma membrane	54.84	33.33
Bra012879.1-P	Field mustard	golgi, peroxisome, plasma membrane	54.84	33.33
Solyc02g084970.2.1	Tomato	plasma membrane, plastid	32.62	33.09
PGSC0003DMT400009288	Potato	extracellular, plasma membrane, vacuole	15.05	31.34
Zm00001d017767_P001	Maize	plastid	30.82	30.82
PGSC0003DMT400009294	Potato	cytosol, peroxisome, plasma membrane, plastid	31.9	28.8
Zm00001d051561_P001	Maize	plastid	30.82	27.39

Protein Annotations

Gene3D:1.20.144.10	MapMan:5.2.2.4	EntrezGene:824256	ProteinID:AEE78725.1	ProteinID:AEE78726.1	EMBL:AK176736
ArrayExpress:AT3G50920	EnsemblPlantsGene:AT3G50920	RefSeq:AT3G50920	TAIR:AT3G50920	RefSeq:AT3G50920-TAIR-G	EnsemblPlants:AT3G50920.1
TAIR:AT3G50920.1	EMBL:BT010900	ProteinID:CAB42921.1	UniProt:F4J220	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0006651
GO:GO:0008150	GO:GO:0008152	GO:GO:0008195	GO:GO:0009058	GO:GO:0009507	GO:GO:0009528
GO:GO:0009536	GO:GO:0009706	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016311
GO:GO:0016787	RefSeq:NP_001030835.1	RefSeq:NP_190661.2	PO:PO:0000013	PO:PO:0000037	PO:PO:0000084
PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185
PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115
PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006
PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038
PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PANTHER:PTHR11247	PANTHER:PTHR11247:SF25
InterPro:P_Acid_Pase_2/haloperoxi_sf	InterPro:P_Acid_Pase_2/haloperoxidase	SMART:SM00014	SUPFAM:SSF48317	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI000034EFE3	SEG:seg	:	:	:	:

Description

LPPE1Lipid phosphate phosphatase epsilon 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4J220]

Coordinates

chr3:-:18922304..18923772

Molecular Weight (calculated)

30597.1 Da

IEP (calculated)

9.904

GRAVY (calculated)

0.446

Length

279 amino acids

Sequence
(BLAST)

001: MAASSSLLLL LHCPTCNFYF DSSSYLKRSR LSSYSSIISR GSPLFVSSFG SMTVKRFSSR VGSRSNDGNE QFGALEQESF INNSSEIRKD LVTGGGIEAI
101: VNRLSKWVVS VLFGSIILLR HDGAALWAVI GSISNSALSV VLKRILNQER PTTTLRSDPG MPSSHAQSIS FISVFAVLSV MEWLGTNGVS LFLSGLILAL
201: GSYFIRLRVS QKLHTSSQVV VGAIVGSLFC ILWYTMWNSL LREAFEASLL VQISVFLFAA TFALAFAAYV VLNWFKDER

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.