Factsheet for GSMUA_Achr10P20640_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 2
mitochondrion 1
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr1P20280_001
GSMUA_Achr3P15760_001
GSMUA_Achr3P31920_001
GSMUA_Achr4P08400_001
GSMUA_Achr4P10230_001
GSMUA_Achr5P06850_001
GSMUA_Achr5P20880_001
GSMUA_Achr6P31860_001
GSMUA_Achr8P11120_001
GSMUA_Achr8P27830_001
GSMUA_Achr9P05440_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G50920.1	GSMUA_Achr11P...	AT3G60600.1	21798944
AT3G50920.1	GSMUA_Achr11P...	AT3G60600.1	21798944
AT3G50920.1	GSMUA_Achr1P20280_001	AT3G60600.1	21798944
AT3G50920.1	GSMUA_Achr5P20880_001	AT3G60600.1	21798944
AT3G50920.1	GSMUA_Achr8P11120_001	AT3G60600.1	21798944
AT3G50920.1	GSMUA_Achr4P10230_001	AT4G19030.1	21798944
AT3G50920.1	GSMUA_Achr10P...	AT5G41600.1	21798944
AT3G50920.1	GSMUA_Achr3P15760_001	AT5G41600.1	21798944
AT3G50920.1	GSMUA_Achr3P31920_001	AT5G41600.1	21798944
AT3G50920.1	GSMUA_Achr4P08400_001	AT5G41600.1	21798944
AT3G50920.1	GSMUA_Achr5P06850_001	AT5G41600.1	21798944
AT3G50920.1	GSMUA_Achr6P31860_001	AT5G41600.1	21798944
AT3G50920.1	GSMUA_Achr8P27830_001	AT5G41600.1	21798944
AT3G50920.1	GSMUA_Achr9P05440_001	AT5G41600.1	21798944
AT3G50920.1	GSMUA_AchrUn_...	AT5G41600.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0023g02150.t01	Wine grape	plasma membrane	53.3	54.02
Solyc02g062570.2.1	Tomato	golgi, plasma membrane, vacuole	47.58	50.0
HORVU6Hr1G068790.1	Barley	mitochondrion	51.54	43.17
TraesCS6D01G252100.1	Wheat	plastid	51.1	42.49
TraesCS6B01G299500.1	Wheat	plastid	50.66	42.28
TraesCS6A01G271900.1	Wheat	mitochondrion	49.78	41.54
PGSC0003DMT400040097	Potato	plastid	48.02	41.13
Bra005332.1-P	Field mustard	extracellular	14.1	41.03
Bra006653.1-P	Field mustard	extracellular, plasma membrane	17.62	40.82
Solyc02g062580.2.1	Tomato	plasma membrane	47.58	40.75
Bra012072.1-P	Field mustard	cytosol, peroxisome, plasma membrane	39.65	40.72
Bra028216.1-P	Field mustard	extracellular	14.1	40.51
TraesCS6A01G271800.1	Wheat	plastid	48.46	40.29
KRH76744	Soybean	plastid	50.66	40.21
KRH28718	Soybean	plastid	51.1	40.14
OQU85552	Sorghum	plastid	47.58	39.42
TraesCS6B01G299400.1	Wheat	plastid	46.26	39.33
Bra037170.1-P	Field mustard	cytosol, peroxisome, plasma membrane	37.44	38.99
Bra031812.1-P	Field mustard	cytosol, peroxisome, plasma membrane	37.44	38.29
Os02t0704500-01	Rice	plastid	45.81	37.82
CDY28991	Canola	cytosol, endoplasmic reticulum, peroxisome	36.56	37.05
Zm00001d017767_P001	Maize	plastid	45.37	36.92
PGSC0003DMT400009288	Potato	extracellular, plasma membrane, vacuole	20.7	35.07
CDY45229	Canola	plastid	40.09	34.21
Solyc02g084970.2.1	Tomato	plasma membrane, plastid	41.41	34.18
CDY28990	Canola	plasma membrane	31.72	32.88
CDY50985	Canola	plastid	40.09	32.5
CDY34432	Canola	cytosol, plasma membrane, plastid	20.26	32.17
Zm00001d051561_P001	Maize	plastid	43.61	31.53
AT3G50920.1	Thale cress	plastid	37.89	30.82
CDY52388	Canola	cytosol, endoplasmic reticulum, golgi	19.38	30.77
PGSC0003DMT400009294	Potato	cytosol, peroxisome, plasma membrane, plastid	41.85	30.74
CDY65309	Canola	plastid	37.89	30.71
CDX73772	Canola	mitochondrion, plastid	33.92	30.68
CDX77963	Canola	cytosol, golgi, peroxisome	26.87	26.07
Bra036849.1-P	Field mustard	cytosol, golgi, peroxisome	26.87	26.07
AT5G66450.3	Thale cress	plastid	34.36	25.32
CDX90676	Canola	golgi, peroxisome, plasma membrane	36.12	17.86
Bra012879.1-P	Field mustard	golgi, peroxisome, plasma membrane	35.24	17.43

Protein Annotations

EnsemblPlants:GSMUA_Achr10P20640_001	EnsemblPlants:GSMUA_Achr10T20640_001	EnsemblPlantsGene:GSMUA_Achr10G20640_001	Gene3D:1.20.144.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:P_Acid_Pase_2/haloperoxi_sf	InterPro:P_Acid_Pase_2/haloperoxidase	PANTHER:PTHR11247	PANTHER:PTHR11247:SF25	PFAM:PF01569
SUPFAM:SSF48317	TMHMM:TMhelix	UniParc:UPI0002969482	UniProt:M0RJY9	MapMan:5.2.2.4	:

Description

phosphatase, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G20640_001]

Coordinates

chr10:-:26528039..26533170

Molecular Weight (calculated)

25276.8 Da

IEP (calculated)

4.956

GRAVY (calculated)

0.500

Length

227 amino acids

Sequence
(BLAST)

001: MTELTRLAAL GSDQDIEEDT APGEVEAMLR TGPFNLDRDF TWRNLEAVLN GTSKWLVAAL FGLAILWKHD AEILWDATGS VINVSLSVTL KRILNHERPV
101: AGLKPDPGMP SSHAQSIFYI EAIFILSMVN HLGIDAFTVS IGSIALLFGS YLSWLRVSQQ LHTYSQVLVG ALLGSCCGVA WYWLWHSFVL EAFISLLWVQ
201: ILVVLGSVML CGAFVVYMIQ HWLRDEP

Best Arabidopsis Sequence Match ( AT5G66450.2 )
(BLAST)

001: MADLVKTNAR RDGEDRFQAL EQEAFISNSS SELQNELVSD AGDGIEAIAN RLSKWIVAAL FGSVLLLRHD GAALWAVIGS VSNSVLSVAL KRILNQERPV
101: ATLRSDPGMP SSHAQSISFI SVFSVFSVME WLGTNVLSLF LSGFILALGS YFTWLRVSQK LHTTSQVVVG AIVGSVYSTL WYVTWNSLVL EAFTSTFSVQ
201: IALFLVAAAS ALGFAVYVLL NWFKDDR

Arabidopsis Description

Phosphatidic acid phosphatase (PAP2) family protein [Source:TAIR;Acc:AT5G66450]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.