Factsheet for Solyc02g084970.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

plastid 4
mitochondrion 2
plasma membrane 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc02g071920.2.1
Solyc03g005980.2.1
Solyc06g074170.2.1
Solyc08g081730.2.1
Solyc11g068750.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G50920.1	Solyc02g071920.2.1	AT4G19030.1	21798944
AT3G50920.1	Solyc03g005980.2.1	AT4G19030.1	21798944
AT3G50920.1	Solyc06g074170.2.1	AT5G22290.1	21798944
AT3G50920.1	Solyc11g068750.1.1	AT5G22290.1	21798944
AT3G50920.1	Solyc08g081730.2.1	AT5G41600.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400009288	Potato	extracellular, plasma membrane, vacuole	31.27	64.18
PGSC0003DMT400009294	Potato	cytosol, peroxisome, plasma membrane, plastid	67.27	59.87
Solyc02g062570.2.1	Tomato	golgi, plasma membrane, vacuole	46.18	58.8
Solyc02g062580.2.1	Tomato	plasma membrane	51.64	53.58
VIT_04s0023g02150.t01	Wine grape	plasma membrane	38.91	47.77
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	34.18	41.41
Bra012072.1-P	Field mustard	cytosol, peroxisome, plasma membrane	32.0	39.82
Bra005332.1-P	Field mustard	extracellular	11.27	39.74
Bra028216.1-P	Field mustard	extracellular	11.27	39.24
Bra006653.1-P	Field mustard	extracellular, plasma membrane	13.82	38.78
Bra031812.1-P	Field mustard	cytosol, peroxisome, plasma membrane	31.27	38.74
Bra037170.1-P	Field mustard	cytosol, peroxisome, plasma membrane	30.55	38.53
KRH76744	Soybean	plastid	40.0	38.46
KRH28718	Soybean	plastid	40.36	38.41
TraesCS6A01G271900.1	Wheat	mitochondrion	37.09	37.5
TraesCS6B01G299500.1	Wheat	plastid	37.09	37.5
TraesCS6D01G252100.1	Wheat	plastid	36.73	37.0
HORVU6Hr1G068790.1	Barley	mitochondrion	35.64	36.16
TraesCS6A01G271800.1	Wheat	plastid	35.64	35.9
Os02t0704500-01	Rice	plastid	35.27	35.27
CDY28991	Canola	cytosol, endoplasmic reticulum, peroxisome	28.73	35.27
TraesCS6B01G299400.1	Wheat	plastid	33.82	34.83
CDY45229	Canola	plastid	33.45	34.59
OQU85552	Sorghum	plastid	34.18	34.31
CDY50985	Canola	plastid	33.82	33.21
Zm00001d017767_P001	Maize	plastid	33.45	32.97
CDY28990	Canola	plasma membrane	26.18	32.88
AT3G50920.1	Thale cress	plastid	33.09	32.62
CDY65309	Canola	plastid	32.36	31.79
CDX73772	Canola	mitochondrion, plastid	27.64	30.28
CDY34432	Canola	cytosol, plasma membrane, plastid	15.64	30.07
Zm00001d051561_P001	Maize	plastid	32.0	28.03
CDY52388	Canola	cytosol, endoplasmic reticulum, golgi	14.55	27.97
AT5G66450.3	Thale cress	plastid	29.82	26.62
CDX77963	Canola	cytosol, golgi, peroxisome	20.0	23.5
Bra036849.1-P	Field mustard	cytosol, golgi, peroxisome	20.0	23.5
CDX90676	Canola	golgi, peroxisome, plasma membrane	30.18	18.08
Bra012879.1-P	Field mustard	golgi, peroxisome, plasma membrane	29.45	17.65

Protein Annotations

Gene3D:1.20.144.10	MapMan:5.2.2.4	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0006651	GO:GO:0008150	GO:GO:0008152
GO:GO:0008195	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016311	GO:GO:0016787	UniProt:K4BB11	PFAM:PF01569	PANTHER:PTHR11247
PANTHER:PTHR11247:SF25	InterPro:P_Acid_Pase_2/haloperoxi_sf	InterPro:P_Acid_Pase_2/haloperoxidase	SUPFAM:SSF48317	EnsemblPlantsGene:Solyc02g084970.2	EnsemblPlants:Solyc02g084970.2.1
TMHMM:TMhelix	UniParc:UPI0002768E4A	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2:+:48007744..48009603

Molecular Weight (calculated)

30842.0 Da

IEP (calculated)

9.213

GRAVY (calculated)

0.500

Length

275 amino acids

Sequence
(BLAST)

001: MVVATTLVNG SILVNQLQFR RLDRFSTFKL DICGKFKFKK SISHCTLIPP KMMMDSVENR AAAAAGDEGV SLGGLEKEAV IDGSMNFSSD GIQAFLNSMS
101: KWLMAAVYGM ILLWRHDMEA LWVTSGGVVN TCLSIALKRI LNHERPVSTL RSDPGMPSSH AQSIFYTVAF SIILMIKFFG FNEMTAVTST LIFAMGSYFS
201: WLRVSQRFHT LNQVAVGAIL GFCFSIFWFW LWDAIVMKAF INHYWVRIVA VVGAAGFSVG FLLYVIRNWV IEDLH

Best Arabidopsis Sequence Match ( AT5G66450.4 )
(BLAST)

001: MAASSSSLLL LHKPTYNFHF AASSVPTYIN SARFRISSSI FPLDRRRRRR IWSVSGFKSM ADLVKTNARR DGEDRFQALE QEAFISNSSS ELQNELVSDA
101: GDGIEAIANR LSKWIVAALF GSVLLLRHDG AALWAVIGSV SNSVLSVALK RILNQERPVA TLRSDPGMPS SHAQSISFIS VFSVFSVMEW LGTNVLSLFL
201: SGFILALGSY FTWLRVSQKL HTTSQVVVGA IVGSVYSTLW YVTWNSLVLE AFTSTFSVQI ALFLVAAASA LGFAVYVLLN WFKDDR

Arabidopsis Description

Phosphatidic acid phosphatase (PAP2) family protein [Source:TAIR;Acc:AT5G66450]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.