Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 6
- extracellular 7
- nucleus 1
- vacuole 4
- plasma membrane 6
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY59304 | Canola | plasma membrane | 87.66 | 85.99 |
| Bra027498.1-P | Field mustard | plasma membrane | 86.36 | 84.71 |
| CDY32939 | Canola | plasma membrane | 86.36 | 84.71 |
| AT1G04340.1 | Thale cress | plasma membrane | 84.42 | 81.76 |
| VIT_05s0049g00200.t01 | Wine grape | extracellular | 64.94 | 63.69 |
| KRG90387 | Soybean | extracellular | 64.29 | 63.06 |
| KRH31721 | Soybean | endoplasmic reticulum | 64.29 | 63.06 |
| KRG92302 | Soybean | extracellular | 62.99 | 61.78 |
| KRH34500 | Soybean | extracellular | 61.69 | 60.51 |
| Solyc06g053660.2.1 | Tomato | plasma membrane | 57.14 | 56.05 |
| TraesCS4A01G415500.1 | Wheat | extracellular | 55.19 | 54.14 |
| GSMUA_Achr4P26720_001 | Banana | extracellular | 54.55 | 53.85 |
| GSMUA_Achr1P01370_001 | Banana | extracellular | 53.9 | 53.21 |
| GSMUA_Achr2P04100_001 | Banana | extracellular | 54.55 | 53.16 |
| TraesCS4D01G312900.1 | Wheat | extracellular | 53.9 | 52.87 |
| Os03t0149200-01 | Rice | extracellular | 53.9 | 52.87 |
| HORVU4Hr1G080140.1 | Barley | extracellular | 53.9 | 52.87 |
| Os04t0181100-01 | Rice | plasma membrane | 53.25 | 52.23 |
| TraesCS4B01G316300.1 | Wheat | extracellular | 53.25 | 52.23 |
| Zm00001d032568_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 36.36 | 51.85 |
| OQU81217 | Sorghum | extracellular | 52.6 | 51.59 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, extracellular, plasma membrane | 51.95 | 50.96 |
| TraesCS2D01G029000.1 | Wheat | extracellular | 51.95 | 50.96 |
| AT4G14420.1 | Thale cress | plasma membrane | 51.95 | 50.63 |
| TraesCS2B01G040200.1 | Wheat | extracellular | 51.3 | 50.32 |
| TraesCS2A01G026900.1 | Wheat | extracellular | 51.3 | 50.32 |
| EER92848 | Sorghum | extracellular | 51.3 | 50.32 |
| Zm00001d048402_P001 | Maize | extracellular, golgi, plasma membrane | 51.3 | 50.32 |
| Os10t0445500-01 | Rice | plasma membrane | 51.3 | 50.0 |
| GSMUA_Achr8P14320_001 | Banana | plasma membrane | 51.3 | 50.0 |
| Zm00001d027680_P003 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 51.3 | 48.17 |
| Zm00001d032483_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 37.66 | 46.77 |
| Zm00001d018662_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 46.1 | 44.38 |
| KRH73866 | Soybean | plastid | 38.96 | 40.27 |
| PGSC0003DMT400042097 | Potato | cytosol | 47.4 | 37.44 |
| Zm00001d025020_P001 | Maize | extracellular, golgi, plasma membrane | 51.95 | 33.06 |
Protein Annotations
| MapMan:35.2 | EntrezGene:834366 | ProteinID:AED94966.1 | ProteinID:ANM69457.1 | ArrayExpress:AT5G43460 | EnsemblPlantsGene:AT5G43460 |
| RefSeq:AT5G43460 | TAIR:AT5G43460 | RefSeq:AT5G43460-TAIR-G | EnsemblPlants:AT5G43460.1 | TAIR:AT5G43460.1 | EMBL:AY057586 |
| ProteinID:BAA97425.1 | EMBL:BT010160 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005783 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | InterPro:HR_lesion | RefSeq:NP_001318735.1 |
| RefSeq:NP_199159.1 | PFAM:PF05514 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PANTHER:PTHR31474 | PANTHER:PTHR31474:SF4 | UniProt:Q9LSW5 | SignalP:SignalP-noTM | TMHMM:TMhelix |
| UniParc:UPI000009DDEB | SEG:seg | : | : | : | : |
Description
At5g43460/MWF20_18 [Source:UniProtKB/TrEMBL;Acc:Q9LSW5]
Coordinates
chr5:+:17459873..17462516
Molecular Weight (calculated)
16904.1 Da
IEP (calculated)
10.657
GRAVY (calculated)
0.510
Length
154 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFFSFLGRV LFASLFILSA WQMFNDGGPA AKELAPKLDL VKAHLSSRLG VTLPKIEVRQ VVATIIALKG VGGLLFVIGN TFGAYLLASY LVVFGPILYD
101: FYNYGPQERH FSLLLTEFLQ SVALFGALLF FIGMKNSTPA KKNLKKRTPK PKAA
101: FYNYGPQERH FSLLLTEFLQ SVALFGALLF FIGMKNSTPA KKNLKKRTPK PKAA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.