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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr1P12060_001
GSMUA_Achr1P20280_001
GSMUA_Achr2P22980_001
GSMUA_Achr3P14270_001
GSMUA_Achr5P20880_001
GSMUA_Achr6P08980_001
GSMUA_Achr7P04280_001
GSMUA_Achr8P11120_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G04340.1 GSMUA_Achr11P... AT1G03630.1 21798944
AT1G04340.1 GSMUA_Achr3P14270_001 AT1G03630.1 21798944
AT1G04340.1 GSMUA_Achr7P04280_001 AT1G03630.1 21798944
AT1G04340.1 GSMUA_Achr1P12060_001 AT3G50910.1 21798944
AT1G04340.1 GSMUA_Achr2P22980_001 AT3G50910.1 21798944
AT1G04340.1 GSMUA_Achr6P08980_001 AT3G50910.1 21798944
AT5G43460.1 GSMUA_Achr11P... AT3G60600.1 21798944
AT5G43460.1 GSMUA_Achr11P... AT3G60600.1 21798944
AT5G43460.1 GSMUA_Achr1P20280_001 AT3G60600.1 21798944
AT5G43460.1 GSMUA_Achr5P20880_001 AT3G60600.1 21798944
AT5G43460.1 GSMUA_Achr8P11120_001 AT3G60600.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr11P... Banana endoplasmic reticulum, extracellular, plasma membrane 82.28 82.8
GSMUA_Achr4P26720_001 Banana extracellular 81.65 82.69
GSMUA_Achr1P01370_001 Banana extracellular 81.65 82.69
Os03t0149200-01 Rice extracellular 79.11 79.62
TraesCS4D01G312900.1 Wheat extracellular 76.58 77.07
TraesCS4B01G316300.1 Wheat extracellular 76.58 77.07
TraesCS4A01G415500.1 Wheat extracellular 75.95 76.43
HORVU4Hr1G080140.1 Barley extracellular 75.32 75.8
GSMUA_Achr2P04100_001 Banana extracellular 74.05 74.05
Os04t0181100-01 Rice plasma membrane 73.42 73.89
TraesCS2B01G040200.1 Wheat extracellular 71.52 71.97
TraesCS2A01G026900.1 Wheat extracellular 70.89 71.34
TraesCS2D01G029000.1 Wheat extracellular 70.89 71.34
OQU81217 Sorghum extracellular 70.25 70.7
Zm00001d032568_P001 Maize endoplasmic reticulum, extracellular, vacuole 47.47 69.44
Os10t0445500-01 Rice plasma membrane 68.99 68.99
Zm00001d048402_P001 Maize extracellular, golgi, plasma membrane 68.35 68.79
EER92848 Sorghum extracellular 67.72 68.15
Zm00001d027680_P003 Maize endoplasmic reticulum, extracellular, plasma membrane 70.25 67.68
Zm00001d018662_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 64.56 63.75
Zm00001d032483_P001 Maize endoplasmic reticulum, extracellular, vacuole 49.37 62.9
KRH32166 Soybean endoplasmic reticulum 61.39 62.18
Solyc09g089670.2.1 Tomato extracellular, plasma membrane, vacuole 62.66 61.49
KRH67349 Soybean plasma membrane 60.13 60.51
CDY47153 Canola endoplasmic reticulum 60.13 60.13
CDY12466 Canola endoplasmic reticulum 60.13 60.13
Bra039861.1-P Field mustard plasma membrane 59.49 59.49
KRG95647 Soybean plasma membrane 58.86 59.24
KRH19536 Soybean endoplasmic reticulum 58.23 58.97
VIT_05s0049g00200.t01 Wine grape extracellular 57.59 57.96
CDY12771 Canola extracellular 56.96 57.69
AT4G14420.1 Thale cress plasma membrane 57.59 57.59
Bra041032.1-P Field mustard extracellular 56.33 57.05
CDY49421 Canola extracellular 55.7 56.41
Solyc03g005470.2.1 Tomato plastid 55.7 55.7
CDY59304 Canola plasma membrane 53.16 53.5
Bra027498.1-P Field mustard plasma membrane 51.9 52.23
CDY32939 Canola plasma membrane 51.9 52.23
KRG90387 Soybean extracellular 51.27 51.59
AT5G43460.1 Thale cress extracellular 50.0 51.3
KRH31721 Soybean endoplasmic reticulum 50.0 50.32
KRG92302 Soybean extracellular 50.0 50.32
AT1G04340.1 Thale cress plasma membrane 50.0 49.69
PGSC0003DMT400044245 Potato cytosol 55.06 49.15
CDY15499 Canola plasma membrane 51.27 49.09
Bra030565.1-P Field mustard plasma membrane 51.27 49.09
KRH34500 Soybean extracellular 48.73 49.04
CDY18220 Canola extracellular, plasma membrane, vacuole 50.0 48.77
CDY60669 Canola extracellular, plasma membrane, vacuole 50.0 48.77
Bra015305.1-P Field mustard extracellular, plasma membrane, vacuole 50.0 48.77
CDX86640 Canola extracellular, plasma membrane, vacuole 50.0 48.17
Solyc06g053660.2.1 Tomato plasma membrane 45.57 45.86
Zm00001d025020_P001 Maize extracellular, golgi, plasma membrane 68.35 44.63
PGSC0003DMT400034860 Potato plastid 51.27 44.02
VIT_05s0049g00210.t01 Wine grape plastid 63.29 43.48
KRH73866 Soybean plastid 36.08 38.26
CDY10063 Canola plasma membrane 38.61 33.7
PGSC0003DMT400042097 Potato cytosol 39.24 31.79
Protein Annotations
EnsemblPlants:GSMUA_Achr8P14320_001EnsemblPlants:GSMUA_Achr8T14320_001EnsemblPlantsGene:GSMUA_Achr8G14320_001GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:HR_lesionPANTHER:PTHR31474PANTHER:PTHR31474:SF5PFAM:PF05514SEG:segSignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI0002965DDCUniProt:M0TQD5MapMan:35.2::
Description
nicotiana lesion-inducing like, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G14320_001]
Coordinates
chr8:+:11034808..11038702
Molecular Weight (calculated)
17711.0 Da
IEP (calculated)
10.463
GRAVY (calculated)
0.490
Length
158 amino acids
Sequence
(BLAST)
001: MGLVSFAGRV FFASVFLLAA YQEFSEFGVD GGPAAKSLRP KYNLFMKHVS SHLGIVVPHV EMKHVIASTI FLKGFGGLLF IFSSSFGAYL LLLYLAFITP
101: VVYGFYNYDI EKSEFVQLFS KFAQNLALFG ALLFFLGMKN SIPRRQPKKV LKSKNKLN
Best Arabidopsis Sequence Match ( AT4G14420.1 )
(BLAST)
001: MELASFLGRA LFVSVFLLSA WQEFNDFGED GGRSAKSLKP KFNAFVNHVT THTGQQLPPV DMKILVAAAI ALKGIGGLLF VFGSSLGAYL LLLHQAVATP
101: ILYDFYNYDV DRKEFGQLFS KFTQSLALLG GLLFFIGMKN SRKHGRQLRK KAPKAKAN
Arabidopsis Description
AT4g14420/dl3250c [Source:UniProtKB/TrEMBL;Acc:O23298]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.