Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g089670.2.1 | Tomato | extracellular, plasma membrane, vacuole | 75.71 | 83.23 |
| GSMUA_Achr1P01370_001 | Banana | extracellular | 53.11 | 60.26 |
| CDY12466 | Canola | endoplasmic reticulum | 53.67 | 60.13 |
| CDY47153 | Canola | endoplasmic reticulum | 53.67 | 60.13 |
| Bra039861.1-P | Field mustard | plasma membrane | 53.11 | 59.49 |
| AT4G14420.1 | Thale cress | plasma membrane | 51.98 | 58.23 |
| GSMUA_Achr4P26720_001 | Banana | extracellular | 50.85 | 57.69 |
| Os03t0149200-01 | Rice | extracellular | 50.28 | 56.69 |
| Zm00001d032568_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 34.46 | 56.48 |
| KRH32166 | Soybean | endoplasmic reticulum | 49.72 | 56.41 |
| CDY12771 | Canola | extracellular | 49.72 | 56.41 |
| Bra041032.1-P | Field mustard | extracellular | 49.72 | 56.41 |
| CDY49421 | Canola | extracellular | 49.15 | 55.77 |
| PGSC0003DMT400034860 | Potato | plastid | 57.63 | 55.43 |
| GSMUA_Achr8P14320_001 | Banana | plasma membrane | 49.15 | 55.06 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, extracellular, plasma membrane | 48.59 | 54.78 |
| HORVU4Hr1G080140.1 | Barley | extracellular | 48.02 | 54.14 |
| KRG95647 | Soybean | plasma membrane | 48.02 | 54.14 |
| TraesCS4D01G312900.1 | Wheat | extracellular | 48.02 | 54.14 |
| KRH19536 | Soybean | endoplasmic reticulum | 47.46 | 53.85 |
| GSMUA_Achr2P04100_001 | Banana | extracellular | 48.02 | 53.8 |
| TraesCS4A01G415500.1 | Wheat | extracellular | 47.46 | 53.5 |
| TraesCS4B01G316300.1 | Wheat | extracellular | 47.46 | 53.5 |
| KRH67349 | Soybean | plasma membrane | 46.89 | 52.87 |
| EER92848 | Sorghum | extracellular | 46.89 | 52.87 |
| Zm00001d027680_P003 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 48.59 | 52.44 |
| Zm00001d048402_P001 | Maize | extracellular, golgi, plasma membrane | 46.33 | 52.23 |
| Os10t0445500-01 | Rice | plasma membrane | 46.33 | 51.9 |
| Os04t0181100-01 | Rice | plasma membrane | 45.2 | 50.96 |
| Zm00001d032483_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 35.59 | 50.81 |
| TraesCS2B01G040200.1 | Wheat | extracellular | 44.07 | 49.68 |
| TraesCS2D01G029000.1 | Wheat | extracellular | 43.5 | 49.04 |
| TraesCS2A01G026900.1 | Wheat | extracellular | 43.5 | 49.04 |
| OQU81217 | Sorghum | extracellular | 43.5 | 49.04 |
| Zm00001d018662_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 42.37 | 46.88 |
| VIT_05s0049g00210.t01 | Wine grape | plastid | 53.11 | 40.87 |
| PGSC0003DMT400042097 | Potato | cytosol | 35.03 | 31.79 |
| Zm00001d025020_P001 | Maize | extracellular, golgi, plasma membrane | 41.81 | 30.58 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400044245 | EnsemblPlantsGene:PGSC0003DMG400017187 | EntrezGene:102601960 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:HR_lesion | PANTHER:PTHR31474 | PANTHER:PTHR31474:SF1 | PFAM:PF05514 | PGSC:PGSC0003DMG400017187 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI00029674F7 | UniProt:M1BFW0 | MapMan:35.2 | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400017187]
Coordinates
chr9:-:55881582..55883524
Molecular Weight (calculated)
19711.1 Da
IEP (calculated)
9.675
GRAVY (calculated)
0.268
Length
177 amino acids
Sequence
(BLAST)
(BLAST)
001: MIWNWDMGSA HLDLRCDWRY PNVFKVDFLD FVVEVGTFWF SEFGSDGGPA AKALGPKFNV LSKHVATHIG FELPHVEMKH LILGAIVLKG LGSLLFIFGS
101: TVGAVLLLVH QAVASPVLYD FYNYDVDKKE FVQLFFKFSQ NLALLGALLF FIGMKNSMPM RSSSSSSKKK GPKAKAN
101: TVGAVLLLVH QAVASPVLYD FYNYDVDKKE FVQLFFKFSQ NLALLGALLF FIGMKNSMPM RSSSSSSKKK GPKAKAN
001: MELASFLGRA LFVSVFLLSA WQEFNDFGED GGRSAKSLKP KFNAFVNHVT THTGQQLPPV DMKILVAAAI ALKGIGGLLF VFGSSLGAYL LLLHQAVATP
101: ILYDFYNYDV DRKEFGQLFS KFTQSLALLG GLLFFIGMKN SRKHGRQLRK KAPKAKAN
101: ILYDFYNYDV DRKEFGQLFS KFTQSLALLG GLLFFIGMKN SRKHGRQLRK KAPKAKAN
Arabidopsis Description
AT4g14420/dl3250c [Source:UniProtKB/TrEMBL;Acc:O23298]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.