Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 5
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 4
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra041032.1-P | Field mustard | extracellular | 99.36 | 99.36 |
| CDY12771 | Canola | extracellular | 96.79 | 96.79 |
| CDY12466 | Canola | endoplasmic reticulum | 92.31 | 91.14 |
| CDY47153 | Canola | endoplasmic reticulum | 92.31 | 91.14 |
| AT4G14420.1 | Thale cress | plasma membrane | 88.46 | 87.34 |
| KRH32166 | Soybean | endoplasmic reticulum | 65.38 | 65.38 |
| KRG95647 | Soybean | plasma membrane | 65.38 | 64.97 |
| KRH67349 | Soybean | plasma membrane | 64.74 | 64.33 |
| Solyc09g089670.2.1 | Tomato | extracellular, plasma membrane, vacuole | 65.38 | 63.35 |
| KRH19536 | Soybean | endoplasmic reticulum | 61.54 | 61.54 |
| Solyc03g005470.2.1 | Tomato | plastid | 62.18 | 61.39 |
| Zm00001d048402_P001 | Maize | extracellular, golgi, plasma membrane | 61.54 | 61.15 |
| EER92848 | Sorghum | extracellular | 60.26 | 59.87 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, extracellular, plasma membrane | 59.62 | 59.24 |
| Zm00001d027680_P003 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 62.18 | 59.15 |
| GSMUA_Achr1P01370_001 | Banana | extracellular | 58.97 | 58.97 |
| Os03t0149200-01 | Rice | extracellular | 58.97 | 58.6 |
| Os10t0445500-01 | Rice | plasma membrane | 58.97 | 58.23 |
| GSMUA_Achr2P04100_001 | Banana | extracellular | 58.97 | 58.23 |
| GSMUA_Achr4P26720_001 | Banana | extracellular | 57.69 | 57.69 |
| Zm00001d032568_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 39.74 | 57.41 |
| TraesCS4A01G415500.1 | Wheat | extracellular | 57.69 | 57.32 |
| OQU81217 | Sorghum | extracellular | 57.05 | 56.69 |
| TraesCS4D01G312900.1 | Wheat | extracellular | 57.05 | 56.69 |
| CDY59304 | Canola | plasma membrane | 56.41 | 56.05 |
| Os04t0181100-01 | Rice | plasma membrane | 56.41 | 56.05 |
| TraesCS4B01G316300.1 | Wheat | extracellular | 56.41 | 56.05 |
| HORVU4Hr1G080140.1 | Barley | extracellular | 56.41 | 56.05 |
| GSMUA_Achr8P14320_001 | Banana | plasma membrane | 56.41 | 55.7 |
| CDY32939 | Canola | plasma membrane | 55.13 | 54.78 |
| CDY60669 | Canola | extracellular, plasma membrane, vacuole | 55.77 | 53.7 |
| CDY18220 | Canola | extracellular, plasma membrane, vacuole | 55.77 | 53.7 |
| TraesCS2B01G040200.1 | Wheat | extracellular | 53.85 | 53.5 |
| Zm00001d018662_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 54.49 | 53.12 |
| TraesCS2A01G026900.1 | Wheat | extracellular | 53.21 | 52.87 |
| CDY15499 | Canola | plasma membrane | 55.77 | 52.73 |
| TraesCS2D01G029000.1 | Wheat | extracellular | 52.56 | 52.23 |
| CDX86640 | Canola | extracellular, plasma membrane, vacuole | 54.49 | 51.83 |
| Zm00001d032483_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 39.74 | 50.0 |
| PGSC0003DMT400044245 | Potato | cytosol | 55.77 | 49.15 |
| PGSC0003DMT400034860 | Potato | plastid | 53.85 | 45.65 |
| VIT_05s0049g00210.t01 | Wine grape | plastid | 65.38 | 44.35 |
| CDY10063 | Canola | plasma membrane | 42.95 | 37.02 |
| Zm00001d025020_P001 | Maize | extracellular, golgi, plasma membrane | 55.13 | 35.54 |
Protein Annotations
| EnsemblPlants:CDY49421 | EnsemblPlantsGene:GSBRNA2T00092996001 | GO:A0A078IHF1 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:HR_lesion | PANTHER:PTHR31474 | PANTHER:PTHR31474:SF1 | PFAM:PF05514 | ProteinID:CDY49421 | ProteinID:CDY49421.1 |
| SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0004EEF577 | UniProt:A0A078IHF1 | MapMan:35.2 |
Description
BnaCnng17310DBnaCnng17310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IHF1]
Coordinates
chrLK032831:-:118327..119833
Molecular Weight (calculated)
17269.1 Da
IEP (calculated)
10.929
GRAVY (calculated)
0.168
Length
156 amino acids
Sequence
(BLAST)
(BLAST)
001: MISFVGRALF VSVFLLSAWQ EFNDFGDNGG RAAKSLRPKF NAFVSHVTTH TGQQLPPIDM KLLVAAAIAL KGIGGLWFVS GSSLGAYLLL LHQAVATPIL
101: YDFYNYDVER KEFSQLFSKF TQSVALVGAL LFFIGMKNSR RHGRQLRKKA PKAKAN
101: YDFYNYDVER KEFSQLFSKF TQSVALVGAL LFFIGMKNSR RHGRQLRKKA PKAKAN
001: MELASFLGRA LFVSVFLLSA WQEFNDFGED GGRSAKSLKP KFNAFVNHVT THTGQQLPPV DMKILVAAAI ALKGIGGLLF VFGSSLGAYL LLLHQAVATP
101: ILYDFYNYDV DRKEFGQLFS KFTQSLALLG GLLFFIGMKN SRKHGRQLRK KAPKAKAN
101: ILYDFYNYDV DRKEFGQLFS KFTQSLALLG GLLFFIGMKN SRKHGRQLRK KAPKAKAN
Arabidopsis Description
AT4g14420/dl3250c [Source:UniProtKB/TrEMBL;Acc:O23298]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.