Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY38431 | Canola | cytosol | 98.66 | 98.66 |
| Bra013976.1-P | Field mustard | cytosol | 97.99 | 97.99 |
| AT5G17450.1 | Thale cress | cytosol | 93.29 | 93.29 |
| CDX85452 | Canola | cytosol | 93.29 | 93.29 |
| CDY55938 | Canola | cytosol | 92.62 | 92.62 |
| VIT_14s0006g01800.t01 | Wine grape | cytosol | 66.44 | 67.81 |
| KRG93769 | Soybean | cytosol | 42.95 | 65.98 |
| KRH01671 | Soybean | cytosol | 63.09 | 64.83 |
| Solyc03g043640.2.1 | Tomato | cytosol | 63.76 | 64.63 |
| KRH70455 | Soybean | cytosol | 62.42 | 64.14 |
| KRG93786 | Soybean | cytosol, plastid | 41.61 | 63.92 |
| KRG93169 | Soybean | cytosol | 61.74 | 63.89 |
| KRH76245 | Soybean | cytosol | 36.91 | 62.5 |
| Solyc02g091300.2.1 | Tomato | cytosol, plastid | 60.4 | 60.81 |
| PGSC0003DMT400078635 | Potato | cytosol, plastid | 60.4 | 60.81 |
| KRH15973 | Soybean | cytosol, plastid | 42.95 | 58.72 |
| PGSC0003DMT400043033 | Potato | cytosol | 61.74 | 58.23 |
| GSMUA_Achr2P07910_001 | Banana | cytosol | 58.39 | 57.62 |
| GSMUA_Achr1P12840_001 | Banana | cytosol | 55.7 | 54.97 |
| CDX72773 | Canola | cytosol | 55.03 | 54.67 |
| CDX96299 | Canola | cytosol | 55.03 | 54.67 |
| CDY12499 | Canola | cytosol | 55.03 | 53.59 |
| CDY04750 | Canola | cytosol | 54.36 | 52.94 |
| CDY21408 | Canola | cytosol | 54.36 | 52.94 |
| CDY25762 | Canola | cytosol | 54.36 | 52.94 |
| CDY07874 | Canola | cytosol | 50.34 | 51.72 |
| CDX88005 | Canola | cytosol | 50.34 | 51.72 |
| CDY65011 | Canola | cytosol | 45.64 | 44.44 |
| CDX90282 | Canola | cytosol | 44.97 | 43.79 |
| CDY12089 | Canola | cytosol | 44.3 | 43.14 |
| CDX72748 | Canola | cytosol | 44.3 | 43.14 |
| CDX86196 | Canola | cytosol | 44.97 | 42.41 |
| CDY42647 | Canola | cytosol | 44.97 | 42.41 |
| CDY41999 | Canola | cytosol | 44.97 | 42.41 |
| CDX75144 | Canola | cytosol | 35.57 | 42.06 |
| CDY36193 | Canola | cytosol | 39.6 | 39.33 |
| CDY17504 | Canola | cytosol | 38.93 | 37.66 |
| CDX76309 | Canola | cytosol | 38.26 | 37.01 |
| CDY52653 | Canola | cytosol | 37.58 | 36.6 |
| CDX69108 | Canola | cytosol | 36.91 | 35.95 |
| CDY05886 | Canola | cytosol | 32.21 | 34.78 |
| CDY08096 | Canola | cytosol | 32.21 | 34.78 |
| CDX72102 | Canola | cytosol | 34.23 | 32.28 |
| CDX76017 | Canola | cytosol | 34.23 | 32.28 |
| CDY27183 | Canola | cytosol | 34.23 | 32.28 |
| CDY47384 | Canola | cytosol, extracellular | 34.23 | 32.08 |
| CDY13354 | Canola | cytosol | 36.91 | 30.9 |
| CDX67533 | Canola | cytosol | 36.91 | 30.9 |
| CDY06206 | Canola | cytosol | 30.2 | 29.8 |
| CDX99542 | Canola | plastid | 36.24 | 29.67 |
| CDX86861 | Canola | plastid | 36.24 | 29.67 |
| CDX94648 | Canola | cytosol | 26.17 | 27.66 |
| CDY57455 | Canola | cytosol | 26.17 | 27.66 |
| CDX85985 | Canola | mitochondrion | 20.81 | 25.83 |
| CDY09978 | Canola | cytosol | 33.56 | 17.12 |
Protein Annotations
| EnsemblPlants:CDY16919 | EnsemblPlantsGene:GSBRNA2T00094833001 | Gene3D:3.30.70.100 | GO:A0A078FV47 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf |
| InterPro:IPR006121 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF47 | PFAM:PF00403 | PFscan:PS50846 | ProteinID:CDY16919 |
| ProteinID:CDY16919.1 | SUPFAM:SSF55008 | UniParc:UPI0004EE4BE1 | UniProt:A0A078FV47 | MapMan:35.1 | : |
Description
BnaC09g40460DBnaC09g40460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FV47]
Coordinates
chrLK032068:-:338677..340551
Molecular Weight (calculated)
16964.5 Da
IEP (calculated)
10.276
GRAVY (calculated)
-0.581
Length
149 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAFDYITSF CSYTYSNAKT KRKPLQTVEI KVKMDCDGCE RRLRNVVRRM KGVKTVEVNR KQSRLTVNGH VDPNKVLKRV KSTGKKAEFW PYIPQHMVYY
101: PFAPGMYDKR APAGHIRNPT QAFPAANAPG ENYISLFSDD NVHAACSIM
101: PFAPGMYDKR APAGHIRNPT QAFPAANAPG ENYISLFSDD NVHAACSIM
001: MGAFDYISSF CSYTYANAKT KRKPLQTVDI KVKMDCDGCE RRVRNVVRRM KGVKSVEVNR KQSRITVNGH VDPNKVLKRV KSTGKKAEFW PYIPQHMVYY
101: PFAPGMYDKR APAGHIRNPT QSFPTANAPE ENYVSLFSDD NVHAACSIM
101: PFAPGMYDKR APAGHIRNPT QSFPTANAPE ENYVSLFSDD NVHAACSIM
Arabidopsis Description
HIPP21Heavy metal-associated isoprenylated plant protein 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9LF57]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.